http://imagej.273.s1.nabble.com/Analyze-3D-skeleton-of-stacks-tp5019872p5019883.html
> It definitely looks like a memory issue. The AnalyzeSkeleton plugin is not
> optimized for very large skeletons. I will try to work on it, but the
> fastest solution right now is to use more RAM.
>
> ignacio
>
> On Fri, Jan 12, 2018 at 4:35 PM, Munarin, Fabiola <
>
[hidden email]
> > wrote:
>
> > Hi Ignacio,
> > I don't get any error, Fiji just closes a few seconds after I click on
> > Analyze Skeleton. I am trying to analyze a stack of 1500 b/w skeleton
> > images, their size is 2-4 GB. I can analyze stacks up to 500 images, that
> > is, their size is around 1GB.
> > My operative system is Windows 7 Enterprise 64-bit, 8GB RAM, and I have
> > also tried to work with high performance resources, setting 30GB as
> maximum
> > memory in Memory and Threads under the Edit menu, but I get the same
> issue.
> > Thanks!
> > Fabiola
> >
> >
> > <
http://www.avg.com/email-signature?utm_medium=email&> > utm_source=link&utm_campaign=sig-email&utm_content=webmail>
> > Virus-free.
> > www.avg.com
> > <
http://www.avg.com/email-signature?utm_medium=email&> > utm_source=link&utm_campaign=sig-email&utm_content=webmail>
> > <#m_-3415130188116227884_m_-8334184731403329370_DAB4FAD8-
> > 2DD7-40BB-A1B8-4E2AA1F9FDF2>
> >
> > On Fri, Jan 12, 2018 at 4:41 AM, Ignacio Arganda-Carreras <
> >
[hidden email]> wrote:
> >
> > > Dear Fabiola,
> > >
> > > Could you please specify the error message you get, the image size and
> > > type, and your computer specifications (operative system, RAM, etc)?
> > >
> > > thanks!
> > >
> > > On Thu, Jan 11, 2018 at 5:58 PM, Munarin, Fabiola <
> > >
[hidden email]
> > > > wrote:
> > >
> > > > Hi! I am a Postdoc at the Coulombe lab, Brown University. I am
> working
> > > with
> > > > the Analyze skeleton Plugin and I am trying to process a stack of
> 1500
> > > > images. However, the software is always crashing when I use stacks
> > > composed
> > > > of more than 550 images (even when I work with high-performance
> > computing
> > > > resources). Do you have any idea how to overcome this problem?
> > > >
> > > > Thanks,
> > > > Fabiola
> > > >
> > > >
> > > > --
> > > > *Fabiola Munarin*
> > > > Post Doc Research Associate
> > > > Coulombe Lab
> > > > Brown University
> > > > School of Engineering
> > > > 184 Hope St, Providence, RI 02912
> > > > Office: Bert 312
> > > > 401-863-5846
> > > >
[hidden email]
> > > >
> > > > *A good head and a good heart are always a formidable combination.*
> > > > *(Nelson Mandela)*
> > > >
> > > > <
http://www.avg.com/email-signature?utm_medium=email&> > > > utm_source=link&utm_campaign=sig-email&utm_content=webmail>
> > > > Virus-free.
> > > > www.avg.com
> > > > <
http://www.avg.com/email-signature?utm_medium=email&> > > > utm_source=link&utm_campaign=sig-email&utm_content=webmail>
> > > > <#DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2>
> > > >
> > > > --
> > > > ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> > > >
> > >
> > >
> > >
> > > --
> > > Ignacio Arganda-Carreras, Ph.D.
> > > Ikerbasque Research Fellow
> > > Departamento de Ciencia de la Computacion e Inteligencia Artificial
> > > Facultad de Informatica, Universidad del Pais Vasco
> > > Paseo de Manuel Lardizabal, 1
> > > 20018 Donostia-San Sebastian
> > > Guipuzcoa, Spain
> > >
> > > Phone : +34 943 01 73 25
> > > Website:
http://sites.google.com/site/iargandacarreras/> > >
> > > --
> > > ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> > >
> >
> >
> >
> > --
> > *Fabiola Munarin*
> > Post Doc Research Associate
> > Coulombe Lab
> > Brown University
> > School of Engineering
> > 184 Hope St, Providence, RI 02912
> > Office: Bert 312
> > 401-863-5846
> >
[hidden email]
> >
> > *A good head and a good heart are always a formidable combination.*
> > *(Nelson Mandela)*
> >
> > --
> > ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >
>
>
>