Posted by
Anovitz, Lawrence {Larry} M. on
Dec 14, 2018; 10:59pm
URL: http://imagej.273.s1.nabble.com/bonej-tp5021576.html
HI all,
I am trying to get Bonej to run 3D fractal dimension analysis
Didn’t have any luck with FIJI/BoneJ2 due to some sort of Java exception (posted last Monday, analyzing an approx. 2300 slice stack)
So I went to Bonej1. The problem now is that 3D viewer won’t correctly install Java3D.
I get the following error when I attempt to auto-install it from 3D viewer.
Can anyone please tell me how to fix this (or get BoneJ2 running? Thank you
--Larry
downloading
http://132.187.25.13/java3d/j3d-1_5_2-macosx.zipto /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/j3d-1_5_2-macosx.zip
create folder /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T//java3d
Extracting j3d-jre.zip to /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d
create folder /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d/j3d-1_5_2-macosx/
Extracting j3d-1_5_2-macosx/j3d-jre.zip to /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d
Extracting all to /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d
create folder /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d/lib/
create folder /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d/lib/ext/
Extracting lib/ext/j3dcore.jar to /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d
Extracting lib/ext/j3dutils.jar to /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d
Extracting lib/ext/vecmath.jar to /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d
Found java extension folder: /Applications/Fiji-Java6.app/java/macosx-java3d/Home/lib/ext
moving /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d/lib/ext/j3dcore.jar to /Applications/Fiji-Java6.app/java/macosx-java3d/Home/lib/ext/j3dcore.jar
moving /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d/lib/ext/j3dutils.jar to /Applications/Fiji-Java6.app/java/macosx-java3d/Home/lib/ext/j3dutils.jar
moving /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/java3d/lib/ext/vecmath.jar to /Applications/Fiji-Java6.app/java/macosx-java3d/Home/lib/ext/vecmath.jar
Detecting Mac OS X operating system, installing Jogl
downloading
http://download.java.net/media/jogl/builds/archive/jsr-231-1.1.1/jogl-1.1.1-macosx-universal.zipto /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/jogl-1.1.1-macosx-universal.zip
create folder /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T//jogl
/var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/jogl not created; exists already
Extracting all to /var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/jogl
/var/folders/sc/wm52xk5528b2m95ztnh15clj5lkhmb/T/jogl-1.1.1-macosx-universal.zip is not a valid zip file.
--
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