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Re: Help to download and install Oval Profile Plugin

Posted by Curtis Rueden on Apr 10, 2019; 2:06pm
URL: http://imagej.273.s1.nabble.com/Help-to-download-and-install-Oval-Profile-Plugin-tp5021950p5022047.html

Hi everyone,

> If you use Fiji, then there is no easy way to compile and run Java
> source code.

That is not the case. Fiji comes bundled with the SciJava Script Editor (
https://imagej.net/Script_Editor), which supports compiling and running
Java code.

> the "Compile and Run..."-feature is still missing in Fiji.

For those who want to read about the technical issues surreounding "Compile
and Run" and other dynamic classpath features of IJ1, see these links:

* https://github.com/imagej/imagej-ui-swing/issues/48
* https://github.com/imagej/imagej-legacy/issues/98

Regards,
Curtis

--
Curtis Rueden
LOCI software architect - https://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - https://imagej.net/User:Rueden
Have you tried the Image.sc Forum? https://forum.image.sc/



On Sat, Mar 30, 2019 at 3:48 AM Herbie <[hidden email]> wrote:

> Good day,
>
> please study the installation recommendations given here:
> <https://imagej.nih.gov/ij/plugins/oval-profile.html>
>
> For plain ImageJ the following works for me:
>
> 1.
> Copy the Java source code to an empty text window (Plugins >> New >>
> Text Window...).
>
> 2.
> Name this file Oval_Profile.java. (The underscore is essential!)
>
> 3.
> Compile an run this code file (Plugins >> Compile and Run...).
>
> 4. The plugin starts.
>
> If you restart ImageJ the plugin will be listed in the Plugins menu.
>
> If you use Fiji, then there is no easy way to compile and run Java
> source code. For whatever reasons the "Compile and Run..."-feature is
> still missing in Fiji.
>
> HTH
>
> Herbie
>
> ::::::::::::::::::::::::::::::::::::::::::::::::::
> Am 30.03.19 um 03:58 schrieb Durgam, Sushmitha S.:
> > Hi. I am unable to install the Oval profile Plug in to obtain radial sum
> of FFT alignment
> >
> >
> > Would appreciate help and any directions
> >
> >
> > Thanks,
> >
> > Sushmitha
> >
> >
> > [The Ohio State University]
> > Sushmitha Durgam, BVSc, PhD, DACVS-LA
> > Assistant Professor, Equine Surgery
> > College of Veterinary Medicine Dept. of Veterinary Clinical Sciences
> > 370 VMAB, 1900 Coffey Road, Columbus, OH 43210
> > 614-292-6661 (Ext - 2) Office / 248-909-6993 Mobile / 614-688-5642 Fax
> > [hidden email]<mailto:[hidden email]>
> >
> >
> >
> >
> > --
> > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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