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Re: Help to download and install Oval Profile Plugin

Posted by Herbie on Apr 11, 2019; 7:16am
URL: http://imagej.273.s1.nabble.com/Help-to-download-and-install-Oval-Profile-Plugin-tp5021950p5022052.html

Good day Sushmitha,

this looks more like a problem with Java-versions.
Do you have different versions of Java installed?
Do you have more than one version of ImageJ installed?

Attached please find a zip-Archive containing three files.

1.
Unzip the archive.

2.
Copy the three files to the "plugins"-folder of your ImageJ-installation.

3.
Restart ImageJ.

4.
Attached please find a screenshot of the "Plugins"-menu after the
installation.

HTH

Herbie

Oval_Profile.zip
<http://imagej.1557.x6.nabble.com/file/t380516/Oval_Profile.zip>  
ScreenShot.png
<http://imagej.1557.x6.nabble.com/file/t380516/ScreenShot.png>  
::::::::::::::::::::::::::::::::::::::::::::::::::

Durgam, Sushmitha S. wrote

> Hello,
>
> Thanks so much for the prompt response. Much appreciate it.
>
> Unfortunately I am still unable to install the plug in. I am able to save
> the text file as you mentioned in 1 and 2
>
> After I compile and run I get this following message.
>
> When I restart ImageJ I do not see the plugin
>
> Any suggestions?
>
> Thanks,
> Sushmitha
>
> I will respond to your question on directionality analysis in a following
> email
>
> On 4/10/19, 5:21 AM, "Herbie" &lt;

> l16@

> &gt; wrote:
>
>     Good day Sushmitha,
>    
>     you are right I was a bit too concise with the description of point 2.
>    
>     For plain ImageJ the following works for me:
>    
>     1.
>     Copy the Java source code to an empty text window (Plugins >> New >>
>     Text Window...).
>    
>     2.
>     Save this file as "Oval_Profile.java" (the underscore is essential!)
> to
>     the plugins-folder of your ImageJ installation.
>    
>     3.
>     Go to "Plugins >> Compile and Run..." and in the then opening file
>     dialog search for the "Oval_Profile.java"-file in the plugins-folder
> and
>     open it.
>    
>     4.
>     The plugin will be compiled and starts running.
>     (It is automatically stored as "Oval_Profile.class"-file in the
>     plugins-folder of your ImageJ installation.)
>    
>     5.
>     After restarting ImageJ you will find the plugin listed in the Plugins
>     menu of ImageJ.
>    
>     HTH
>    
>     Herbie
>     __________________________
>    
>     PS:
>     What is your opinion about the results I've provide concerning
>     orientation analyses?
>    
>     :::::::::::::::::::::::::::
>     > Dear Herbie,
>     >
>     > I am unable to install this plugin
>     >
>     > I am able to do step1
>     > In step 2 - where do you save the java file? In macros?
>     > Does this matter in Mac or PC. Tried on a Mac
>     >
>     > I think I am messing up in saving the coding file and therefore
> unable to run this code file.
>     >
>     > Next when I compile and run I cannot find the Oval Profile plug in
> at all.
>     >
>     > Thanks for the info
>     >
>     > Sushmitha
>     >
>     > On 3/30/19, 4:48 AM, "ImageJ Interest Group on behalf of Herbie"
> &lt;

> IMAGEJ@.NIH

>  on behalf of

> l16@

> &gt; wrote:
>     >
>     >      Good day,
>     >      
>     >      please study the installation recommendations given here:
>     >      &lt;https://imagej.nih.gov/ij/plugins/oval-profile.html&gt;
>     >      
>     >      For plain ImageJ the following works for me:
>     >      
>     >      1.
>     >      Copy the Java source code to an empty text window (Plugins >>
> New >>
>     >      Text Window...).
>     >      
>     >      2.
>     >      Name this file Oval_Profile.java. (The underscore is
> essential!)
>     >      
>     >      3.
>     >      Compile an run this code file (Plugins >> Compile and Run...).
>     >      
>     >      4. The plugin starts.
>     >      
>     >      If you restart ImageJ the plugin will be listed in the Plugins
> menu.
>     >      
>     >      If you use Fiji, then there is no easy way to compile and run
> Java
>     >      source code. For whatever reasons the "Compile and
> Run..."-feature is
>     >      still missing in Fiji.
>     >      
>     >      HTH
>     >      
>     >      Herbie
>     >      
>     >      ::::::::::::::::::::::::::::::::::::::::::::::::::
>     >      Am 30.03.19 um 03:58 schrieb Durgam, Sushmitha S.:
>     >      > Hi. I am unable to install the Oval profile Plug in to obtain
> radial sum of FFT alignment
>     >      >
>     >      >
>     >      > Would appreciate help and any directions
>     >      >
>     >      >
>     >      > Thanks,
>     >      >
>     >      > Sushmitha
>     >      >
>     >      >
>     >      > [The Ohio State University]
>     >      > Sushmitha Durgam, BVSc, PhD, DACVS-LA
>     >      > Assistant Professor, Equine Surgery
>     >      > College of Veterinary Medicine Dept. of Veterinary Clinical
> Sciences
>     >      > 370 VMAB, 1900 Coffey Road, Columbus, OH 43210
>     >      > 614-292-6661 (Ext - 2) Office / 248-909-6993 Mobile /
> 614-688-5642 Fax
>     >      >

> durgam.3@

> &lt;mailto:

> durgam.3@

> &gt;
>     >      >
>     >      >
>     >      >
>     >      >
>     >      > --
>     >      > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>     >      >
>     >      
>     >      --
>     >      ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>     >      
>     >
>    
>
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
>
> Screen Shot 2019-04-11 at 2.30.31 AM.png (558K)
> &lt;http://imagej.1557.x6.nabble.com/attachment/5022051/0/Screen%20Shot%202019-04-11%20at%202.30.31%20AM.png&gt;





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