Selecting specific slice from the summary table

Posted by aw29 on Apr 11, 2019; 2:03pm
URL: http://imagej.273.s1.nabble.com/Selecting-specific-slice-from-the-summary-table-tp5022054.html

Hi!

I'm currently working on code that will allow me to threshold and analyze
two channels (1 and 2) for multiple images. The first channel works
perfectly, but the second one is having trouble transferring data to my
excel spreadsheet because of the "Process Stack?" pop-up window. After I go
through and do all of the thresholding and analysis, I get to this part:

IJ.run("Analyze Particles...", "summarize slice", );
IJ.renameResults("Results");
IJ.run("Read and Write Excel", "file_mode=queue_write sheet=Mouse_"+
filename);

However, I just realized that the pop-up window that comes up"Process
Stack?" after I run "Analyze Particles" is processing all three images and
not just the one that I am currently thresholding. Is there a way to select
"no" on the "Process Stack?" window when it asks me if I want to process all
three images?
Or could I possibly select "slice 2" from the summary table to send to the
excel spreadsheet if there isn't a way to select "no"?



                       
                       





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