http://imagej.273.s1.nabble.com/Help-to-download-and-install-Oval-Profile-Plugin-tp5021950p5022107.html
> Hello. Finally have the oval profile plot working.
>
> Many thanks for all the help and info.
>
> Is there any way to assign the axes to the radial sum plot that comes about?
>
> Right now in picture 1 - the axes go up to 25000
> Where as the one in picture 2 goes upto 6000
>
> These are for comparative images.
> Would love to display them next to eachother and can see the peak and trough in pic 1 and relatively flat line (indicating lack of alignment) in pic 2
>
> Any help would be appreciated.
>
> Best,
> Sushmitha
>
> On 4/12/19, 12:24 PM, "Herbie" <
[hidden email]> wrote:
>
> Glen,
>
> according to a screenshot made available with an earlier post of
> Sushmitha, she uses plain ImageJ not Fiji.
>
> Regards
>
> Herbie
>
>
> Am 12.04.19 um 16:04 schrieb Glen MacDonald:
> > On the Mac, open the Applications folder and right-click on the Fiji.app icon. then select ’Show Package Contents’.
> >
> > Glen
> >
> >> On Apr 11, 2019, at 9:42 PM, Durgam, Sushmitha S. <
[hidden email]> wrote:
> >>
> >> Hello,
> >>
> >> I am still unable to get Oval Profile installed on imageJ
> >>
> >> I was able to unzip the archive you sent.
> >> How do I copy the three class files into plugins folder on a Mac?
> >> Seems like I may be doing that step wrong.
> >>
> >> Thanks,
> >> Sushmitha
> >>
> >> On 4/11/19, 3:17 AM, "Herbie" <
[hidden email]> wrote:
> >>
> >> Good day Sushmitha,
> >>
> >> this looks more like a problem with Java-versions.
> >> Do you have different versions of Java installed?
> >> Do you have more than one version of ImageJ installed?
> >>
> >> Attached please find a zip-Archive containing three files.
> >>
> >> 1.
> >> Unzip the archive.
> >>
> >> 2.
> >> Copy the three files to the "plugins"-folder of your ImageJ-installation.
> >>
> >> 3.
> >> Restart ImageJ.
> >>
> >> 4.
> >> Attached please find a screenshot of the "Plugins"-menu after the
> >> installation.
> >>
> >> HTH
> >>
> >> Herbie
> >>
> >> Oval_Profile.zip
> >> <
http://imagej.1557.x6.nabble.com/file/t380516/Oval_Profile.zip>
> >> ScreenShot.png
> >> <
http://imagej.1557.x6.nabble.com/file/t380516/ScreenShot.png>
> >> ::::::::::::::::::::::::::::::::::::::::::::::::::
> >>
> >> Durgam, Sushmitha S. wrote
> >>> Hello,
> >>>
> >>> Thanks so much for the prompt response. Much appreciate it.
> >>>
> >>> Unfortunately I am still unable to install the plug in. I am able to save
> >>> the text file as you mentioned in 1 and 2
> >>>
> >>> After I compile and run I get this following message.
> >>>
> >>> When I restart ImageJ I do not see the plugin
> >>>
> >>> Any suggestions?
> >>>
> >>> Thanks,
> >>> Sushmitha
> >>>
> >>> I will respond to your question on directionality analysis in a following
> >>> email
> >>>
> >>> On 4/10/19, 5:21 AM, "Herbie" <
> >>
> >>> l16@
> >>
> >>> > wrote:
> >>>
> >>> Good day Sushmitha,
> >>>
> >>> you are right I was a bit too concise with the description of point 2.
> >>>
> >>> For plain ImageJ the following works for me:
> >>>
> >>> 1.
> >>> Copy the Java source code to an empty text window (Plugins >> New >>
> >>> Text Window...).
> >>>
> >>> 2.
> >>> Save this file as "Oval_Profile.java" (the underscore is essential!)
> >>> to
> >>> the plugins-folder of your ImageJ installation.
> >>>
> >>> 3.
> >>> Go to "Plugins >> Compile and Run..." and in the then opening file
> >>> dialog search for the "Oval_Profile.java"-file in the plugins-folder
> >>> and
> >>> open it.
> >>>
> >>> 4.
> >>> The plugin will be compiled and starts running.
> >>> (It is automatically stored as "Oval_Profile.class"-file in the
> >>> plugins-folder of your ImageJ installation.)
> >>>
> >>> 5.
> >>> After restarting ImageJ you will find the plugin listed in the Plugins
> >>> menu of ImageJ.
> >>>
> >>> HTH
> >>>
> >>> Herbie
> >>> __________________________
> >>>
> >>> PS:
> >>> What is your opinion about the results I've provide concerning
> >>> orientation analyses?
> >>>
> >>> :::::::::::::::::::::::::::
> >>>> Dear Herbie,
> >>>>
> >>>> I am unable to install this plugin
> >>>>
> >>>> I am able to do step1
> >>>> In step 2 - where do you save the java file? In macros?
> >>>> Does this matter in Mac or PC. Tried on a Mac
> >>>>
> >>>> I think I am messing up in saving the coding file and therefore
> >>> unable to run this code file.
> >>>>
> >>>> Next when I compile and run I cannot find the Oval Profile plug in
> >>> at all.
> >>>>
> >>>> Thanks for the info
> >>>>
> >>>> Sushmitha
> >>>>
> >>>> On 3/30/19, 4:48 AM, "ImageJ Interest Group on behalf of Herbie"
> >>> <
> >>
> >>> IMAGEJ@.NIH
> >>
> >>> on behalf of
> >>
> >>> l16@
> >>
> >>> > wrote:
> >>>>
> >>>> Good day,
> >>>>
> >>>> please study the installation recommendations given here:
> >>>> <
https://imagej.nih.gov/ij/plugins/oval-profile.html>> >>>>
> >>>> For plain ImageJ the following works for me:
> >>>>
> >>>> 1.
> >>>> Copy the Java source code to an empty text window (Plugins >>
> >>> New >>
> >>>> Text Window...).
> >>>>
> >>>> 2.
> >>>> Name this file Oval_Profile.java. (The underscore is
> >>> essential!)
> >>>>
> >>>> 3.
> >>>> Compile an run this code file (Plugins >> Compile and Run...).
> >>>>
> >>>> 4. The plugin starts.
> >>>>
> >>>> If you restart ImageJ the plugin will be listed in the Plugins
> >>> menu.
> >>>>
> >>>> If you use Fiji, then there is no easy way to compile and run
> >>> Java
> >>>> source code. For whatever reasons the "Compile and
> >>> Run..."-feature is
> >>>> still missing in Fiji.
> >>>>
> >>>> HTH
> >>>>
> >>>> Herbie
> >>>>
> >>>> ::::::::::::::::::::::::::::::::::::::::::::::::::
> >>>> Am 30.03.19 um 03:58 schrieb Durgam, Sushmitha S.:
> >>>>> Hi. I am unable to install the Oval profile Plug in to obtain
> >>> radial sum of FFT alignment
> >>>>>
> >>>>>
> >>>>> Would appreciate help and any directions
> >>>>>
> >>>>>
> >>>>> Thanks,
> >>>>>
> >>>>> Sushmitha
> >>>>>
> >>>>>
> >>>>> [The Ohio State University]
> >>>>> Sushmitha Durgam, BVSc, PhD, DACVS-LA
> >>>>> Assistant Professor, Equine Surgery
> >>>>> College of Veterinary Medicine Dept. of Veterinary Clinical
> >>> Sciences
> >>>>> 370 VMAB, 1900 Coffey Road, Columbus, OH 43210
> >>>>> 614-292-6661 (Ext - 2) Office / 248-909-6993 Mobile /
> >>> 614-688-5642 Fax
> >>>>>
> >>
> >>> durgam.3@
> >>
> >>> <mailto:
> >>
> >>> durgam.3@
> >>
> >>> >
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>> --
> >>>>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >>>>>
> >>>>
> >>>> --
> >>>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >>>>
> >>>>
> >>>
> >>>
> >>>
> >>> --
> >>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >>>
> >>>
> >>> Screen Shot 2019-04-11 at 2.30.31 AM.png (558K)
> >>> <
http://imagej.1557.x6.nabble.com/attachment/5022051/0/Screen%20Shot%202019-04-11%20at%202.30.31%20AM.png>> >>
> >>
> >>
> >>
> >>
> >> --
> >> Sent from:
http://imagej.1557.x6.nabble.com/> >>
> >> --
> >> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >>
> >>
> >>
> >> --
> >> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >
> > --
> > ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >
>
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> ImageJ mailing list:
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>