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Re: How to resolve "no plot window"

Posted by Curtis Rueden on Jun 07, 2019; 4:34pm
URL: http://imagej.273.s1.nabble.com/How-to-resolve-no-plot-window-tp5022234p5022236.html

Hi,

It seems like an issue with batch mode. It works for me when I comment out
the setBatchMode(true).

Also, as an aside, you may want to change:

  saveAs("Results", output + filename);

To:

  saveAs("Results", output + filename + ".txt");

So that your results aren't saved into files that look like (but are not)
images.

Regards,
Curtis

--
Curtis Rueden
LOCI software architect - https://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - https://imagej.net/User:Rueden
Have you tried the Image.sc Forum? https://forum.image.sc/



On Fri, Jun 7, 2019 at 8:14 AM fieryice12 <[hidden email]>
wrote:

> I am writing a macro to batch process multiple files in a folder. When I
> run
> this code, I'm getting the error message "No plot window in line 6". What
> is
> causing this and how can it be fixed? Thanks in advance.
>
> function action(output, filename)
> {
>         open(input + filename);
>         makeRectangle(75, 47, 40, 42);
>         run("Plot Z-axis Profile", "profile=time");
>         Plot.showValues();
>         saveAs("Results", output + filename);
>         close();
> }
>
> input = "C:/Users/Admin/Desktop/Input/";
> output = "C:/Users/Admin/Desktop/Output/";
>
> setBatchMode(true);
> list = getFileList(input);
> for (i = 0; i < list.length; i++)
> {
>         action(output, list[i]);
> }
> setBatchMode(false);
>
>
>
> --
> Sent from: http://imagej.1557.x6.nabble.com/
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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