http://imagej.273.s1.nabble.com/Re-imageJ-g-ratio-calculator-tp5022242.html
It is a problem with the G Ratio Calculator plugin.
anyone on the list here (legally) fix it for you.
You could write to the author directly for support. Note that the plugin is
versions of ImageJ and Fiji. The PDF manual for the plugin using ImageJ
).
that work with more recent versions of the software.
> Hi!
>
> I'm trying to use the G Ratio Caclulator from CIF to analyse some images:
> (
>
http://cifweb.unil.ch/index.php?option=com_docman&task=doc_details&gid=31&Itemid=57)
>
>
> I'm running it through FiJi. I keep getting the following Console box error
> coming up when I try to "Start measurements" and then click on an axon.
> Does
> anyone know a fix?!
>
> Thanks!
>
>
>
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
> Exception in thread "Run$_AWT-EventQueue-0" java.lang.NullPointerException
> at
> GRatioCalculator$Cell_Outliner_CIF$Mouse_Listener.mousePressed(GRatioCalculator.java:148)
>
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:280)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at
> java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279)
> at java.awt.Component.processMouseEvent(Component.java:6536)
> at java.awt.Component.processEvent(Component.java:6304)
> at java.awt.Component.dispatchEventImpl(Component.java:4889)
> at java.awt.Component.dispatchEvent(Component.java:4711)
> at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
> at java.awt.EventQueue.access$500(EventQueue.java:97)
> at java.awt.EventQueue$3.run(EventQueue.java:709)
> at java.awt.EventQueue$3.run(EventQueue.java:703)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
>
> at java.awt.EventQueue$4.run(EventQueue.java:733)
> at java.awt.EventQueue$4.run(EventQueue.java:731)
> at java.security.AccessController.doPrivileged(Native Method)
> at
> java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
>
> at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
> at
> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
>
> at
> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
>
> at
> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
>
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
> at
> java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
> at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
>
>
>
> --
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> --
> ImageJ mailing list:
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