Re: How to combine more than two stacks?

Posted by Curtis Rueden-2 on Oct 09, 2019; 9:17pm
URL: http://imagej.273.s1.nabble.com/How-to-combine-more-than-two-stacks-tp5022509p5022513.html

Hi Brian,

Have a look at the "Multi Stack Montage" plugin:
  https://imagej.net/Multi_Stack_Montage

Regards,
Curtis

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Curtis Rueden
Software architect, LOCI/Eliceiri lab - https://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - https://imagej.net/User:Rueden
Have you tried the Image.sc Forum? https://forum.image.sc/



On Wed, Oct 9, 2019 at 4:06 PM Brian Grabiner <[hidden email]>
wrote:

> Hi,
>
> So Concatenate just puts the images at the end of one another, which
> doesn't help. Unless I'm misunderstanding your point.
>
> Brian
>
> On 10/9/19, 4:06 PM, "ImageJ Interest Group on behalf of CARL Philippe
> (LBP)" <[hidden email] on behalf of [hidden email]> wrote:
>
>     *** EXTERNAL EMAIL: Use caution before replying, clicking links, and
> opening attachments ***
>
>     Dear Brian,
>     Why aren't you using Image>Stacks>Tools>Concatenete?
>     This method able to combine 4 stacks in one shot.
>     And for further automatization you should use the
> Plugins>Macros>Record... on one concatenation and then use macros.
>     My best regards,
>     Philippe
>
>
>     Philippe CARL
>     Laboratoire de Bioimagerie et Pathologies
>     UMR 7021 CNRS - Université de Strasbourg
>     Faculté de Pharmacie
>     74 route du Rhin
>     67401 ILLKIRCH
>     Tel : [phone]
>
>     ----- Mail original -----
>     De: "Brian Grabiner" <[hidden email]>
>     À: "imagej" <[hidden email]>
>     Envoyé: Mercredi 9 Octobre 2019 19:33:50
>     Objet: How to combine more than two stacks?
>
>     Hi,
>
>     I have 9 time-lapse stacks (1 channel only), with 13 timepoints
> (slices) per stack, taken from 9 separate fields. I'd like to make a larger
> 'mega-stack' with the 9 stacks stitched together (NOT concatenated). Right
> now, I use the Image->Stacks->Tools->Combine function to combine two of
> these stacks into one, then save that one, then do it again and again and
> again... There must be a faster/easier way to do this. Any help would be
> greatly appreciated.
>
>     Thanks!
>
>     Brian
>
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