Re: Does IMAGEJ have a watershed segmentation function similar with the marker based watershed segmentation in Avizo

Posted by Ignacio Arganda-Carreras-2 on Nov 26, 2019; 11:15am
URL: http://imagej.273.s1.nabble.com/Does-IMAGEJ-have-a-watershed-segmentation-function-similar-with-the-marker-based-watershed-segmentato-tp5022707p5022708.html

Dear Yongqiang,

MorphoLibJ's marker-controlled watershed methods is as good as your makers.
What is the difference you notice with respect to Avizo's method?

Have you tried the Interactive Marker-controlled Watershed plugin
<https://imagej.net/Interactive_Marker-controlled_Watershed> or the
Morphological
Segmentation plugin <https://imagej.net/Morphological_Segmentation> as well?

Best,

On Tue, Nov 26, 2019 at 11:49 AM Yongqiang Chen <
[hidden email]> wrote:

> Hi ImageJ experts,
>
> I want to know that if ImageJ has a watershed segmentation function
> similar with the marker-based watershed segmentation in Avizo?
>
> I tried the watershed segmentation in the MorphoLibJ, but the results are
> not as good as the watershed in Avizo.
>
> Please give me some guidance.
>
> Regards,
> Yongqiang
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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Ignacio Arganda-Carreras, Ph.D.
Ikerbasque Research Fellow
Departamento de Ciencia de la Computacion e Inteligencia Artificial
Facultad de Informatica, Universidad del Pais Vasco
Paseo de Manuel Lardizabal, 1
20018 Donostia-San Sebastian
Guipuzcoa, Spain

Phone : [phone]
Website: http://sites.google.com/site/iargandacarreras/

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