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Re: [ext] Re: Stitching plugin cannot find TIFF files

Posted by Stephan.Preibisch@mdc-berlin.de on Dec 02, 2019; 11:52pm
URL: http://imagej.273.s1.nabble.com/Stitching-plugin-cannot-find-TIFF-files-tp5022734p5022737.html

Hi, please try using / or \\ instead of \ on Windows...

Best,
Stephan

Sent from my iPhone

> On Dec 2, 2019, at 16:49, Felipe Contreras <[hidden email]> wrote:
>
> Hi,
> Have you tried placing the images in a folder without whitespaces?
> Try with a pair of them to rule out that possible issue.
> Best,
> Felipe
>
>> On Mon, 2 Dec 2019 at 20:44, jdavisknow <[hidden email]>
>> wrote:
>>
>> I will be stitching 2x2 images 7 slices in depth for 3 channels when I can
>> get the stitching plugin to find my files, but I am having trouble right
>> out
>> of the gate because FIJI cannot find the TIFF files that I have exported
>> from Leica. I receive the following error log:
>>
>> Loading (0, 0): C:\Users\user\Desktop\619e top section DIC\tile_01.tif ...
>> ERROR: Cannot find file: 'C:\Users\user\Desktop\619e top section
>> DIC\tile_01.tif' - abort stitching.
>> ERROR: Error during tile discovery, or invalid grid type. Aborting.
>>
>> How can I resolve this first step? Is there a good tutorial for stitching
>> multi channel z-stacks somewhere?
>>
>>
>>
>> --
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>>
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>>
>
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