Re: Clean-up ROIs

Posted by Gabriel Landini on Jan 17, 2020; 2:19pm
URL: http://imagej.273.s1.nabble.com/Clean-up-ROIs-tp5022832p5022833.html

The right one is 4-connected, the left one is 8-connected.
IJ natively supports 8-connected regions.

You can analyse 4-connected regions using  the Particles4 plugin, but before
jumping into that, please make sure that you understand the implications of
changing the connectivity of your regions.

Cheers

Gabriel


On Friday, 17 January 2020 14:02:17 GMT you wrote:

> Dear all,
> Please find under the following link:
> http://punias.free.fr/ImageJ/Clean_up_ROIs.jpg
> a picture of two ROIs.
> The ROI on the left had been obtained through a threshold process followed
> by an Analyze particles. As the right ROI is obtained by a "by hand
> cleaning" of the right one. My question is whether there may be a way to
> perform such a "cleaning" automatically? I thank you very much in advance
> for your lighting on this.
> My best regards,
> Philippe
>
> Philippe CARL
> Laboratoire de Bioimagerie et Pathologies
> UMR 7021 CNRS - Université de Strasbourg
> Faculté de Pharmacie
> 74 route du Rhin
> 67401 ILLKIRCH
> Tel : [phone]
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html