Re: Specifying a predetermined ROI

Posted by Herbie on
URL: http://imagej.273.s1.nabble.com/Specifying-a-predetermined-ROI-tp5023001p5023019.html

Greetings Kees,

my macro also works without the rotation.
It is the automatic contour tracing that required it (my macro dates
back to May 2018). Because automatic contour tracing isn't presently
considered (but could be altered for mostly vertical operation), the
rotation is irrelevant.

Regards

Herbie

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Am 05.03.20 um 16:18 schrieb Straatman, Kees (Dr.):

> Dear Abdul,
>
> If you have already a selection you can skip the first 3 lines in macro 1 and the first 4 lines in macro 2 and start with roiManager("add");  It is doing the same as in Herbie's macro code but does not require the turn the image. Check if the number of pixels is equal to the 200 µm required.
>
> Best wishes
>
> Kees
>
> -----Original Message-----
> From: ImageJ Interest Group <[hidden email]> On Behalf Of Abdulhameed Bakreen
> Sent: 05 March 2020 14:41
> To: [hidden email]
> Subject: Re: Specifying a predetermined ROI
>
> Dear Kees,
>
> Thank you for your macros. However, I have not been able to bring them to work as they're requesting I select the ischemic border after running them, even when it's already selected. Have I missed some steps?
>
> Anyways, the macro from Herbie has been working very well for me, and I will proceed with it.
>
> Once again, I appreciate your effort, Kees. Thanks.
>
> Regards,
> Abdul
>
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