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Re: curvature along the outline of a thresholded object

Posted by fabrice senger-2 on Jul 11, 2020; 11:26am
URL: http://imagej.273.s1.nabble.com/curvature-along-the-outline-of-a-thresholded-object-tp5023589p5023662.html

Dear all,
I really enjoyed this thread. I'm right in the assumption that in the end
to get the curvature you're sampling the contour with a number of points
and use 3 consecutive points to retrieve the radius of curvature? If, so,
how do you set the distance between those points, as for small values you
will run into noise...

Le sam. 11 juil. 2020 à 08:02, Robert Dougherty <[hidden email]> a écrit :

>  Thomas,
> I have updated the plugin at http://www.optinav.info/Curvature.htm.
> Version 5 shows tabular output and is probably more accurate than my
> earlier version.
>
> Bob
>
>
>
>
>     On Sunday, July 5, 2020, 10:14:07 AM PDT, Thomas Fischer <
> [hidden email]> wrote:
>
>  Dear Bob,
>
> My reply is late because I had computer problems. The result of the plugin
> looks nice. In order to use it I would need two features
> 1) A parameter to tune the sensitivity. Right now it is not sensitive
> enough for my purpose. I am aware that an increase in sensitivity would
> make the result more noisy. But as with the plugin of Thomas I would do the
> smoothing afterwards.
> 2) A list of the curvature values along the circumference. Just looking at
> the nice result is not enough in my case. I have to extract numbers from
> this list.
>
> I am content with the plugin of Thomas. But as we say in German: the better
> is the enemy of the good.
>
> Best regards, Thomas
>
>
>
>
>
> Am So., 5. Juli 2020 um 07:33 Uhr schrieb Robert Dougherty <
> [hidden email]
> >:
>
> >  Gabriel,
> > Thanks.  In case it matters, there is a new version with smoother
> > calculation and a black background.
> > Bob
> >
> >    On Saturday, July 4, 2020, 11:33:56 AM PDT, Gabriel Landini <
> > [hidden email]> wrote:
> >
> >  Thanks Bob, I can confirm that it works fine.
> > I think colourblind observers (red-green type) would see the green as
> some
> > shades of yellow and blue as blue. At lease that is what the Dichromacy
> > plugin
> > shows.
> > Regards
> >
> > Gabriel
> >
> >
> > On Saturday, 4 July 2020 18:05:09 BST you wrote:
> > >  Gabriel,
> > > In the meantime, I tried and failed to track down how ImageJ is
> supposed
> > to
> > > load the Phase LUT. Giving up, I changed the code to use another
> > > sign-friendly LUT that I coded explicitly.  Now Curvature displays the
> > > results in green-blue. Going forward, it may be a question of which
> color
> > > scheme is better.  One could experiment by running the new version of
> > > Curvature and then manually changing the LUT to Phase to simulate the
> old
> > > version.  Perhaps green-blue is better for colorblindness than the
> > red-blue
> > > scheme of Phase?
> > >
> > > Bob
> >
> > --
> > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >
> >
> > --
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> >
>
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>
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