Batch mode and Results window

Posted by Pedro J CamelloDr Pedro J Camello on
URL: http://imagej.273.s1.nabble.com/Batch-mode-and-Results-window-tp5024652.html

Hi all,

I need to open images in a folder and their matching files of multiple ROIs coordinates (several hundreds per image) to perform measurements.
A single macro works fine, but using setbatchmode(true) to make it faster, I do not get any Results window, and therefore I can“t access measurements. I have tried to place setbatchmode("show") or setbatchmode(true) at different places in the loop without success.
Is this normal? No access to Results window if setbatchmode is enabled?

My macro follows:
setBatchMode(true);
run("Set Measurements...", "mean redirect=None decimal=2");

//listaArchivos is an array containing my list of files
for (i = 0; i<listaArchivos.length;i++) {
        open(carpetaROIs + File.separator + ROIs[i]); //carpetaROIs and ROIs are the folder and the list of archive for the rois
        open(carpeta + File.separator + listaArchivos[i]); carpeta and listaArchivos are the folder and the list of images
         roiManager("Measure");
        close("ROI Manager");
        close("*");
       
}
 saveAs("Results", carpeta + File.separator + ROIs[i] + "_Histogra" + ".txt");

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