unwanted results in result table

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unwanted results in result table

Krs5
Dear all,

When in a macro I use Analyse Particles on imageA and only select Summarize followed by Find Maxima using as output type "Count" on imageB I get for the first image also the results in the Result table from imageA, followed by the results from imageB. For the next images this does not happen anymore.

Example:
run("HeLa Cells (1.3M, 48-bit RGB)");
run("Split Channels");
setAutoThreshold("Default dark");
//run("Threshold...");
setOption("BlackBackground", false);
run("Convert to Mask");
run("Analyze Particles...", "size=1.33-Infinity circularity=0.50-1.00 exclude summarize");
selectWindow("C1-hela-cells.tif");
run("Find Maxima...", "noise=500 output=Count");
selectWindow("C3-hela-cells.tif");
run("Analyze Particles...", "size=1.33-Infinity circularity=0.50-1.00 exclude summarize");
selectWindow("C1-hela-cells.tif");
run("Find Maxima...", "noise=500 output=Count");

Best wishes

Kees

Dr Ir K.R. Straatman
Senior Experimental Officer
Advanced Imaging Facility
Centre for Core Biotechnology Services
University of Leicester
http://www2.le.ac.uk/colleges/medbiopsych/facilities-and-services/cbs/lite/aif
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Re: unwanted results in result table

Rasband, Wayne (NIH/NIMH) [E]
On Dec 1, 2015, at 12:03 PM, Straatman, Kees (Dr.) <[hidden email]> wrote:

> Dear all,
>
> When in a macro I use Analyse Particles on imageA and only select
> Summarize followed by Find Maximausing as output type "Count” on
> imageB I get for the first image also the results in the Result table
> from imageA, followed by the results from imageB. For the next
> images this does not happen anymore.

This bug is fixed in the latest ImageJ daily build (1.50f9).

-wayne


> Example:
> run("HeLa Cells (1.3M, 48-bit RGB)");
> run("Split Channels");
> setAutoThreshold("Default dark");
> //run("Threshold...");
> setOption("BlackBackground", false);
> run("Convert to Mask");
> run("Analyze Particles...", "size=1.33-Infinity circularity=0.50-1.00 exclude summarize");
> selectWindow("C1-hela-cells.tif");
> run("Find Maxima...", "noise=500 output=Count");
> selectWindow("C3-hela-cells.tif");
> run("Analyze Particles...", "size=1.33-Infinity circularity=0.50-1.00 exclude summarize");
> selectWindow("C1-hela-cells.tif");
> run("Find Maxima...", "noise=500 output=Count);



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Re: unwanted results in result table

Krs5
Dear Wayne,

Many thanks!

Kees

________________________________________
From: ImageJ Interest Group [[hidden email]] on behalf of Rasband, Wayne (NIH/NIMH) [E] [[hidden email]]
Sent: 01 December 2015 19:03
To: [hidden email]
Subject: Re: unwanted results in result table

On Dec 1, 2015, at 12:03 PM, Straatman, Kees (Dr.) <[hidden email]> wrote:

> Dear all,
>
> When in a macro I use Analyse Particles on imageA and only select
> Summarize followed by Find Maximausing as output type "Count” on
> imageB I get for the first image also the results in the Result table
> from imageA, followed by the results from imageB. For the next
> images this does not happen anymore.

This bug is fixed in the latest ImageJ daily build (1.50f9).

-wayne


> Example:
> run("HeLa Cells (1.3M, 48-bit RGB)");
> run("Split Channels");
> setAutoThreshold("Default dark");
> //run("Threshold...");
> setOption("BlackBackground", false);
> run("Convert to Mask");
> run("Analyze Particles...", "size=1.33-Infinity circularity=0.50-1.00 exclude summarize");
> selectWindow("C1-hela-cells.tif");
> run("Find Maxima...", "noise=500 output=Count");
> selectWindow("C3-hela-cells.tif");
> run("Analyze Particles...", "size=1.33-Infinity circularity=0.50-1.00 exclude summarize");
> selectWindow("C1-hela-cells.tif");
> run("Find Maxima...", "noise=500 output=Count);



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