AGScan/ microarray image quantification tool based on imageJ

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AGScan/ microarray image quantification tool based on imageJ

Rémi Cathelin
Dear list members,

We are happy to announce you the first release of AGScan.
AGScan is a micro-array image processing software developped by the
SIGENAE team.
http://www.sigenae.org/

It is an evolution of BZScan.. BZScan was developed by the TAGC
(http://tagc.univ-mrs.fr/ ) from 2002 to 2004. BZScan is a radioactive
DNA micro-array image processing software based on the JAI library

AGScan main features are:
- able to use single or multiple ( up to 3) channel images as input
- image manipulation and processing based on ImageJ
- automatic grid alignment (global and local)
- batch processing mode
- plugin support, to add new file formats, alignment or quantification
methods...
- national language support

This software is freely available using  the following address:
http://mulcyber.toulouse.inra.fr/projects/agscan/

The current ongoing work is:
- user documentation
- code annotation
- plugin development documentation
- new fluorescent image quantification plugins

Feel free to send all your comments, questions, suggestions (or even
home made plugins) about AGScan using the different trackers and forums
facilities provided on the AGScan site.

Regards,

R?mi

----------------------------------------------
Remi CATHELIN
INRA - SIGENAE Team
BP 52627 - 31326 CASTANET-TOLOSAN cedex FRANCE
Phone: 33 (0)5 61 28 54 44
Email: [hidden email]
----------------------------------------------

Web site: http://www.sigenae.org/
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Xgrid

Michael Herron
Last January there were a few posts inquiring about Xgrid usage with  
ImageJ.

Has anyone tried to implement Xgrid control of ImageJ since then?

Mike


Michael J. Herron,  U of MN, Dept. of Entomology
   [hidden email]
      612-624-3688 (office) 612-625-5299 (FAX)