Amira Mesh reader and writer

[dscho]

Hi list,

I hereby release the first version of our Amira Mesh plugins. We actually
work quite a lot with Amira, and therefore have many files in that format.

The website is

http://wbgn013.biozentrum.uni-wuerzburg.de/ImageJ/

There is also a little toy which reads Amira Surface files, and displays
them in a window where you can rotate, shift and zoom.

After participating in the exciting workshop held by Professor Barthel at
the conference, I am contemplating a port to ImageJ3D.

Ciao,
Dscho

[Boris Joffe]

I have a question about the 3D Object Counter plugin.

In my hands it did not react on changing the voxel size in
Image-Properties...
Looks like it always used voxel as the unit of measurement.
Did I do something wrong?

Regards
Boris Joffe

[Fabrice Cordelières]

Quick answer:
You haven't done anything wrong, the plugin doesn't retrieve the calibration
values: therefore, all results are expressed in voxels. If you'd like to get
the volume of your particles, simply multiply this value by the unitary
volume (x calibration x y calibration x z calibration).

Fabrice


 
Fabrice Cordelières, PhD
 
Institut Curie - Section de recherche/ CNRS UMR 146
Plateforme d'Imagerie Cellulaire et Tissulaire
Bâtiment 112 - Centre universitaire
91405 Orsay Cedex
FRANCE
 
Tél. : [phone]
Fax. : [phone]

-----Message d'origine-----
De : ImageJ Interest Group [mailto:[hidden email]] De la part de Boris
Joffe
Envoyé : jeudi 17 août 2006 00:17
À : [hidden email]
Objet : a 3D Object Counter plugin question

I have a question about the 3D Object Counter plugin.

In my hands it did not react on changing the voxel size in
Image-Properties...
Looks like it always used voxel as the unit of measurement.
Did I do something wrong?

Regards
Boris Joffe