Bug within ImageJ (not Fiji)?

[CARL Philippe (LBP)]

Dear all / Wayne,

Somebody contacted me about some problems with the use of the Radial Profile
Extended plugin within ImageJ:

http://rsb.info.nih.gov/ij/plugins/radial-profile-ext.html

by means of a macro using the Ext. functions.

And indeed, running the following macro:

run("Blobs (25K)");

print("begin");

run("Radial Profile Angle", "x_center=128 y_center=127 radius=127.50
starting_angle=0 integration_angle=180");

print("end");

print(Ext.getBinSize);

print(Ext.getStackSize);

print(Ext.getXValue(0));              // XValue[Ext.getBinSize]

print(Ext.getYValue(0, 0));          //
YValue[Ext.getStackSize][Ext.getBinSize]

is working correctly within Fiji, but not within ImageJ where it seems to
have some problems with the Ext. features.

And such features were (probably) working correctly (as well on ImageJ) some
time ago (since a colleague using the Radial Profile Extended plugin is
working exclusively on ImageJ).

Thus I tried as well to install an older version of ImageJ, and with the
version 1.48 there is as well the same problem.

I thank you very much in advance for your help on this issue.

My best regards,

Philippe

 

Philippe CARL

Laboratoire de Biophotonique et Pharmacologie

UMR 7213 CNRS - Université de Strasbourg

Faculté de Pharmacie

74 route du Rhin

67401 ILLKIRCH

Tel : [phone]

 


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[Rasband, Wayne (NIH/NIMH) [E]]

On Jan 23, 2015, at 8:27 AM, Philippe CARL <[hidden email]> wrote:
>
> Dear all / Wayne,
>
> Somebody contacted me about some problems with the use of the Radial Profile
> Extended plugin within ImageJ:
>
> http://rsb.info.nih.gov/ij/plugins/radial-profile-ext.html
>
> by means of a macro using the Ext. functions.

The latest ImageJ daily build (1.49p1) fixes a bug that caused plugins, such as Radial Profile Extended, that use a NonBlockingGenericDialog to hang when they were called from a macro.

-wayne

> And indeed, running the following macro:
>
> run("Blobs (25K)");
>
> print("begin");
>
> run("Radial Profile Angle", "x_center=128 y_center=127 radius=127.50
> starting_angle=0 integration_angle=180");
>
> print("end");
>
> print(Ext.getBinSize);
>
> print(Ext.getStackSize);
>
> print(Ext.getXValue(0));              // XValue[Ext.getBinSize]
>
> print(Ext.getYValue(0, 0));          //
> YValue[Ext.getStackSize][Ext.getBinSize]
>
> is working correctly within Fiji, but not within ImageJ where it seems to
> have some problems with the Ext. features.
>
> And such features were (probably) working correctly (as well on ImageJ) some
> time ago (since a colleague using the Radial Profile Extended plugin is
> working exclusively on ImageJ).
>
> Thus I tried as well to install an older version of ImageJ, and with the
> version 1.48 there is as well the same problem.
>
> I thank you very much in advance for your help on this issue.
>
> My best regards,
>
> Philippe
>
>
>
> Philippe CARL
>
> Laboratoire de Biophotonique et Pharmacologie
>
> UMR 7213 CNRS - Université de Strasbourg
>
> Faculté de Pharmacie
>
> 74 route du Rhin
>
> 67401 ILLKIRCH
>
> Tel : [phone]
>
>
>
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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