Calibration Error

[Ray Bonds]

Hello Everyone,

 

I need help with a calibration issue that I am having.  My process is as
follows:

 

1. Open and calibrate my image and use "Global" setting in the Set
Scale dialog.
2. Close the Image
3. Run my macro files which opens and processes several images.

 

During macro execution I receive an error message "The calibration of
this image conflicts with the current global calibration".  

 

1. How should I interpret/fix this?  I would like to set a global
calibration setting for the all images.

 

 

 

 

I looked at the ImageJ News section on the website and saw that on in
version 1.39t, 3 March 2008

that this error message was added to the code "An error message is
displayed when a calibrated image is opened and "Global" calibration is
enabled."

 

 

 

[Justin Walker-3]

I run into this often.  Your calibration image probably is not the same
size as your processed images.  I don't know what ImageJ throws a hissy
about that, but it does.

If you check the 'Disable these Messages' box, and uncheck the 'Disable
Global Calibration' Box,  it will use the global calibration (and not
pop up that box until the next time you open ImageJ).

Hope that helps

- Justin Walker
University of Maryland

Bonds, Ray wrote:

> Hello Everyone,
>
>  
>
> I need help with a calibration issue that I am having.  My process is as
> follows:
>
>  
>
> 1. Open and calibrate my image and use "Global" setting in the Set
> Scale dialog.
> 2. Close the Image
> 3. Run my macro files which opens and processes several images.
>
>  
>
> During macro execution I receive an error message "The calibration of
> this image conflicts with the current global calibration".  
>
>  
>
> 1. How should I interpret/fix this?  I would like to set a global
> calibration setting for the all images.
>
>  
>
>  
>
>  
>
>  
>
> I looked at the ImageJ News section on the website and saw that on in
> version 1.39t, 3 March 2008
>
> that this error message was added to the code "An error message is
> displayed when a calibrated image is opened and "Global" calibration is
> enabled."
>
>  
>
>  
>
>  
>  

... [show rest of quote]

[Wayne Rasband]

> Hello Everyone,
>
> I need help with a calibration issue that I am having.  My process is
> as
> follows:
>
> 1. Open and calibrate my image and use "Global" setting in the Set
> Scale dialog.
> 2. Close the Image
> 3. Run my macro files which opens and processes several images.
>
> During macro execution I receive an error message "The calibration of
> this image conflicts with the current global calibration".
>
> 1. How should I interpret/fix this?  I would like to set a global
> calibration setting for the all images.

... [show rest of quote]

Your macro is probably opening an image with spatial calibration that
differs from the global spatial calibration. The ImageJ 1.41g daily
build assumes you know what you are doing and does not display this
error message if you are opening the image in a macro.

-wayne

> I looked at the ImageJ News section on the website and saw that on in
> version 1.39t, 3 March 2008
>
> that this error message was added to the code "An error message is
> displayed when a calibrated image is opened and "Global" calibration is
> enabled."
>
>
>
>
>
>
>