Cell Counter plug-in questions - change labels, append results table

[PEB]

Hi - A couple questions about Cell Counter Plug in.  1. Is it possible to change the names of the Types in the Cell counter?  For example, I'd like to rename these to different species.  2. I have hundreds of images to analyse - I see that I can open multiple images and create a Stack (But how do you open multiple images at one time?).  I see the Results table reflects the counts for each image (Slice) - Can I set the file name to be the row label, rather than just Slice 1, 2, 3,....?

Thanks!

Paul

[jphillips]

I don't have the answer for the above, but was wondering the same thing and was hoping reposting would send this out again. Does anyone out there know how to change the types to species names?

Thanks!

[S. Pagakis (IIBEAA)]

I think the "cell counter" plugin has this functionality

Stamatis

On 12 Mar, 2013, at 3:54 AM, jphillips wrote:

> I don't have the answer for the above, but was wondering the same thing and
> was hoping reposting would send this out again. Does anyone out there know
> how to change the types to species names?
>
> Thanks!
>
>
>
> --
> View this message in context: http://imagej.1557.n6.nabble.com/Cell-Counter-plug-in-questions-change-labels-append-results-table-tp4715886p5002108.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

... [show rest of quote]

******************************
Stamatis Pagakis Ph.D.
Head, Biological Imaging
Biomedical Research Foundation, Academy of Athens
Soranou Efessiou 4, Athens 115 27 - Greece
M:     [phone]                
W:     [phone]
FAX: [phone]
http://www.bioacademy.gr/faculty-details/HM4/Stamatis
--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[jphillips]

Hi Stamis,
I've been using the cell counter but can't  find anywhere to change the types to the species I want. Do you know how to make the results table editable or the cell counter pop up before I start selecting species?  I tried to monitor the coding so I could insert my own titles, but because it's already a set up plugin, it didn't allow me to...From what I've tried, the only way to label by species name using cell counter is to export my results to excel, which I'd rather not do for this project.

______________________________________________________________________________

S. Pagakis (IIBEAA) wrote

I think the "cell counter" plugin has this functionality

Stamatis

On 12 Mar, 2013, at 3:54 AM, jphillips wrote:

> I don't have the answer for the above, but was wondering the same thing and
> was hoping reposting would send this out again. Does anyone out there know
> how to change the types to species names?
> View this message in context: http://imagej.1557.n6.nabble.com/Cell-Counter-plug-in-questions-change-labels-append-results-table-tp4715886p5002108.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html



******************************
Stamatis Pagakis Ph.D.
Head, Biological Imaging
Biomedical Research Foundation, Academy of Athens
Soranou Efessiou 4, Athens 115 27 - Greece
M:     [phone]                
W:     [phone]
FAX: [phone]
http://www.bioacademy.gr/faculty-details/HM4/Stamatis
--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html

... [show rest of quote]

... [show rest of quote]

[S. Pagakis (IIBEAA)]

Dear J (???)

I am sorry I do not think the names can be changed and I do not have the code.  Maybe you could contact the author directly?

However I do have the code of an earlier version of cell counter (which I attach) and the names can be changed in there.  I only hope the functionality of this version is enough for your needs.

Good Luck

Stamatis



--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html


On 12 Mar, 2013, at 7:12 PM, jphillips wrote:

> Hi Stamis,
> I've been using the cell counter but can't  find anywhere to change the
> types to the species I want. Do you know how to make the results table
> editable or the cell counter pop up before I start selecting species?  I
> tried to monitor the coding so I could insert my own titles, but because
> it's already a set up plugin, it didn't allow me to...From what I've tried,
> the only way to label by species name using cell counter is to export my
> results to excel, which I'd rather not do for this project.
>
> ______________________________________________________________________________
>
>
> S. Pagakis (IIBEAA) wrote
>> I think the "cell counter" plugin has this functionality
>>
>> Stamatis
>>
>> On 12 Mar, 2013, at 3:54 AM, jphillips wrote:
>>
>>> I don't have the answer for the above, but was wondering the same thing
>>> and
>>> was hoping reposting would send this out again. Does anyone out there
>>> know
>>> how to change the types to species names?
>>> View this message in context:
>>> http://imagej.1557.n6.nabble.com/Cell-Counter-plug-in-questions-change-labels-append-results-table-tp4715886p5002108.html
>>> Sent from the ImageJ mailing list archive at Nabble.com.
>>>
>>> --
>>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>>
>>
>>
>> ******************************
>> Stamatis Pagakis Ph.D.
>> Head, Biological Imaging
>> Biomedical Research Foundation, Academy of Athens
>> Soranou Efessiou 4, Athens 115 27 - Greece
>> M:     [phone]                
>> W:     [phone]
>> FAX: [phone]
>> http://www.bioacademy.gr/faculty-details/HM4/Stamatis
>> --
>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
>
>
>
>
> --
> View this message in context: http://imagej.1557.n6.nabble.com/Cell-Counter-plug-in-questions-change-labels-append-results-table-tp4715886p5002130.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

... [show rest of quote]

... [show rest of quote]

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html