Greetings,
For some reason Duplicator.run(ImagePlus) will use a separate method to
crop a single slice ImagePlus vs a multi-slice ImagePlus, even when the
"stack" option was passed. The single slice method removes all the "\n"
in the sliceLabel on my datasets. I suspect that it is due to the
following line:
if (label.length()>250 && label.indexOf('\n')>0 &&
label.contains("0002,")) ...
Although the ImagePlus is not a DICOM dataset, my sliceLabel(s) meet the
first two conditions, albeit, I can not see where it meets the last
condition.
Fred
PS: this work for a single slice ImagePlus
ImageStack ris = smrimp.getStack();
ImageProcessor rip = ris.getProcessor(1);
rip.setRoi(w/2-h/2,0,h,h);
rip = rip.crop();
String rsl = ris.getSliceLabel(1);
ris = new ImageStack(h,h);
ris.addSlice(rsl,rip);
smrimp.setStack(ris);
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