Getting x,y of Maxima

[alexwatson]

Does anyone know how to get the x,y position of the ROIs produced by the "Find Maxima" function programmatically?

I would prefer some sort of array so that I can easily process them.  I assume it would have something to do with instantiating an RoiManager.

[Lai Ding]

Use "List" as output type can give the X/Y coordinates

Lai Ding, PhD | Optical Imaging Manager
Harvard NeuroDiscovery Center
Harvard Medical School
[phone]
http://www.neurodiscovery.harvard.edu/ 


-----Original Message-----
From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of alexwatson
Sent: Thursday, June 07, 2012 1:52 PM
To: [hidden email]
Subject: Getting x,y of Maxima

Does anyone know how to get the x,y position of the ROIs produced by the
"Find Maxima" function programmatically?

I would prefer some sort of array so that I can easily process them.  I
assume it would have something to do with instantiating an RoiManager.

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[alexwatson]

I found what I was looking for here, if anyone else is curious:

http://imagej.1557.n6.nabble.com/Getting-x-y-coordinates-of-the-multi-point-tool-td4490440.html

[Michael Schmid]

Hi Alex,

you can get the coordinates as Polygon vertices using the call
  MaximumFinder.getMaxima(ImageProcessor ip, double tolerance, boolean
excludeOnEdges)

You need ImageJ 1.46a or later for this.

Michael
______________________________________________________________________


On Thu, June 7, 2012 19:52, alexwatson wrote:

> Does anyone know how to get the x,y position of the ROIs produced by the
> "Find Maxima" function programmatically?
>
> I would prefer some sort of array so that I can easily process them.  I
> assume it would have something to do with instantiating an RoiManager.
>
> --
> View this message in context:
> http://imagej.1557.n6.nabble.com/Getting-x-y-of-Maxima-tp4998940.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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