Hyperstack retention for Weka Segmentation

[Patrick.dummer]

Hi,

I am running a Weka segmentation on hyperstacks (4 channel Z stacks). The output images are automatically placed into standard stacks, without regard to channel/color information of the input. Is it possible to retain the input hyperstack organization in the output?

Best,
Patrick

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[Ignacio Arganda-Carreras-2]

Hello Patrick,

Not right now. As it is now, you need to either create a classifier per
channel or compose a color image and calculate the classifier based on
that. Is the information of each channel that relevant for the
classification?

ignacio

On Mon, Jun 8, 2015 at 4:54 PM, Patrick Dummer <[hidden email]>
wrote:

> Hi,
>
> I am running a Weka segmentation on hyperstacks (4 channel Z stacks). The
> output images are automatically placed into standard stacks, without regard
> to channel/color information of the input. Is it possible to retain the
> input hyperstack organization in the output?
>
> Best,
> Patrick
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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Ignacio Arganda-Carreras, Ph.D.
Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech
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