David,
the error says that some method in ImageJ, which should be there is
missing (weird). Which version of ImageJ are you running, and which
operating system and Java version are you using? Can you put your data
stack somewhere, where I can download it or mail me a small dataset that
shows the same behaviour?
Joachim
David Knecht-charter schrieb:
> I have a single channel z/t stack that I am trying to open in Image5D.
> When I try to run the plugin, I can open the series of images, but when
> I add the info for Z and t numbers to the dialog box, I get the
> following error. Any idea what it means? Thanks- Dave
>
> java.lang.NoSuchMethodError: ij.ImagePlus.getGlobalCalibration()Lij/
> measure/Calibration;
> at Image5D.storeCurrentChannelProperties(Image5D.java:1118)
> at Image5D.setCurrentPosition(Image5D.java:336)
> at Image5D.setCurrentPosition(Image5D.java:314)
> at Image5D.setSlice(Image5D.java:296)
> at Image5D.setStack(Image5D.java:239)
> at Image5D.expandDimension(Image5D.java:1043)
> at Image5D.<init>(Image5D.java:117)
> at Image5D.<init>(Image5D.java:125)
> at Stack_to_Image5D.run(Stack_to_Image5D.java:126)
> at Open_Series_As_Image5D.run(Open_Series_As_Image5D.java:32)
> at ij.IJ.runUserPlugIn(IJ.java:265)
> at ij.IJ.runPlugIn(IJ.java:109)
> at ij.Executer.runPlugIn(Executer.java:169)
> at ij.Executer.runCommand(Executer.java:131)
> at ij.Executer.run(Executer.java:63)
> at java.lang.Thread.run(Thread.java:552)
>
>
> Dr. David Knecht
> Department of Molecular and Cell Biology
> U-3125
> 91 N. Eagleville Rd.
> University of Connecticut
> Storrs, CT 06269
> 860-486-2200
> 860-486-4331 (fax)
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Dr. Joachim Walter
Till I.D. GmbH
c\o BioImaging Zentrum
Großhaderner Str. 2
82152 Martinsried, Germany
Tel.: +49-89-2180-74189
Fax: +49-89-2180-9974189
[hidden email]
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