Image J

Previous Topic Next Topic
 
classic Classic list List threaded Threaded
1 message Options
Reply | Threaded
Open this post in threaded view
|

Image J

Nicolas PREYAT
Hi,
I'm a new user of this software, it is useful for me to align some  
slices but I encounter a problem. When the size of my stack increase  
( more than 100MB, I think), if I close it and try to open it in a  
second step, here is what's happening:
While the file is opening I can see in the status bar the correct  
number of slices but when the software charged the half of the  
correct size of the stack, Image J provide me a file with the just  
the half of what it could be.
I hope somebody knows what I'm telling about.
Thank in advance for your help.
Preyat Nicolas

NB:
1) in Edit/option menu I put the memory to 600MB so it is not the  
problem.
2) When I closed the file, a window appeared, perhaps is there a link:
java.lang.NullPointerException
        at java.io.FileOutputStream.writeBytes(Native Method)
        at java.io.FileOutputStream.write(FileOutputStream.java:260)
        at java.io.BufferedOutputStream.write(BufferedOutputStream.java:105)
        at java.io.DataOutputStream.write(DataOutputStream.java:90)
        at ij.io.ImageWriter.write8BitImage(ImageWriter.java:28)
        at ij.io.ImageWriter.write8BitStack(ImageWriter.java:38)
        at ij.io.ImageWriter.write(ImageWriter.java:180)
        at ij.io.TiffEncoder.write(TiffEncoder.java:103)
        at ij.io.FileSaver.saveAsTiffStack(FileSaver.java:108)
        at ij.io.FileSaver.saveAsTiff(FileSaver.java:70)
        at ij.io.FileSaver.save(FileSaver.java:46)
        at ij.plugin.Commands.save(Commands.java:55)
        at ij.plugin.Commands.run(Commands.java:27)
        at ij.IJ.runPlugIn(IJ.java:127)
        at ij.Executer.runCommand(Executer.java:95)
        at ij.Executer.run(Executer.java:49)
        at java.lang.Thread.run(Thread.java:613)