ImageJ on 64 bit opensuse 11.1

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ImageJ on 64 bit opensuse 11.1

Roger Koot
Hi all,

I'm trying to run ImageJ 1.42 on opensuse 11.1 x86_64. The program
starts just fine, I can load an image, but when I, for instance, change
the type of the image from, say, 8 bit to RGB, the trouble starts.
Whatever I try, I can't seem to close the window with the image. It pops
up a 'save file' dialog, but neither button works (yes/no/cancel).
Even shutting down ImageJ doesn't work because of the same bug/feature.
I also tried different java versions (java 1.5-sun, java-1.6-openjdk,
java-1.6-sun, java-1.7-icedtea), but that didn't help either.
I hope you can help me.

TIA
Roger
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Re: ImageJ on 64 bit opensuse 11.1

Boris Epstein
Which subrelease of ImageJ 1.42 are you running..,

It is strange, we run it on 64-bit OpenSuSE 11.1 all the time and
generally it seems to perform OK.

Boris.

Roger Koot wrote:

> Hi all,
>
> I'm trying to run ImageJ 1.42 on opensuse 11.1 x86_64. The program
> starts just fine, I can load an image, but when I, for instance, change
> the type of the image from, say, 8 bit to RGB, the trouble starts.
> Whatever I try, I can't seem to close the window with the image. It pops
> up a 'save file' dialog, but neither button works (yes/no/cancel).
> Even shutting down ImageJ doesn't work because of the same bug/feature.
> I also tried different java versions (java 1.5-sun, java-1.6-openjdk,
> java-1.6-sun, java-1.7-icedtea), but that didn't help either.
> I hope you can help me.
>
> TIA
> Roger
>  

--
*Boris Epstein
National Resource For Imaging Mass Spectrometry
<http://www.nrims.hms.harvard.edu/>
Cambridge, MA
Mobile: (617) 816-9654*


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
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Re: ImageJ on 64 bit opensuse 11.1

Roger Koot
I'm running ImageJ 1.42q with java 1.6.0-openjdk 64 bit.

Roger


On 09/22/2009 02:41 PM, Boris Epstein wrote:

> Which subrelease of ImageJ 1.42 are you running..,
>
> It is strange, we run it on 64-bit OpenSuSE 11.1 all the time and
> generally it seems to perform OK.
>
> Boris.
>
> Roger Koot wrote:
>  
>> Hi all,
>>
>> I'm trying to run ImageJ 1.42 on opensuse 11.1 x86_64. The program
>> starts just fine, I can load an image, but when I, for instance, change
>> the type of the image from, say, 8 bit to RGB, the trouble starts.
>> Whatever I try, I can't seem to close the window with the image. It pops
>> up a 'save file' dialog, but neither button works (yes/no/cancel).
>> Even shutting down ImageJ doesn't work because of the same bug/feature.
>> I also tried different java versions (java 1.5-sun, java-1.6-openjdk,
>> java-1.6-sun, java-1.7-icedtea), but that didn't help either.
>> I hope you can help me.
>>
>> TIA
>> Roger
>>  
>>    
>
>  
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Re: ImageJ on 64 bit opensuse 11.1

dscho
In reply to this post by Roger Koot
Hi,

On Tue, 22 Sep 2009, Roger Koot wrote:

> I'm trying to run ImageJ 1.42 on opensuse 11.1 x86_64. The program
> starts just fine, I can load an image, but when I, for instance, change
> the type of the image from, say, 8 bit to RGB, the trouble starts.

Please try Fiji (http://pacific.mpi-cbg.de/).  One of Fiji's missions is
to prevent issues such as yours.

Ciao,
Johannes
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Re: ImageJ on 64 bit opensuse 11.1

Boris Epstein
In reply to this post by Roger Koot
Roger,

Perhaps try switching to the Sun's Java 1.6. We had some problems with
the OpenJDK version.

Use

update-alternatives --config java

(Run it as root.) Only takes a second to try this one...

Boris.

Roger Koot wrote:

> I'm running ImageJ 1.42q with java 1.6.0-openjdk 64 bit.
>
> Roger
>
>
> On 09/22/2009 02:41 PM, Boris Epstein wrote:
>  
>> Which subrelease of ImageJ 1.42 are you running..,
>>
>> It is strange, we run it on 64-bit OpenSuSE 11.1 all the time and
>> generally it seems to perform OK.
>>
>> Boris.
>>
>> Roger Koot wrote:
>>  
>>    
>>> Hi all,
>>>
>>> I'm trying to run ImageJ 1.42 on opensuse 11.1 x86_64. The program
>>> starts just fine, I can load an image, but when I, for instance, change
>>> the type of the image from, say, 8 bit to RGB, the trouble starts.
>>> Whatever I try, I can't seem to close the window with the image. It pops
>>> up a 'save file' dialog, but neither button works (yes/no/cancel).
>>> Even shutting down ImageJ doesn't work because of the same bug/feature.
>>> I also tried different java versions (java 1.5-sun, java-1.6-openjdk,
>>> java-1.6-sun, java-1.7-icedtea), but that didn't help either.
>>> I hope you can help me.
>>>
>>> TIA
>>> Roger
>>>  
>>>    
>>>      
>>  
>>    

--
*Boris Epstein
National Resource For Imaging Mass Spectrometry
<http://www.nrims.hms.harvard.edu/>
Cambridge, MA
Mobile: (617) 816-9654*


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
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Re: ImageJ on 64 bit opensuse 11.1

Roger Koot
That did the trick! Which is kinda weird because I tried sun's jdk an
hour ago without success. Probably made a typo or something.

You're my hero!
Thanx a lot

Roger

On 09/22/2009 03:06 PM, Boris Epstein wrote:

> Roger,
>
> Perhaps try switching to the Sun's Java 1.6. We had some problems with
> the OpenJDK version.
>
> Use
>
> update-alternatives --config java
>
> (Run it as root.) Only takes a second to try this one...
>
> Boris.
>
> Roger Koot wrote:
>  
>> I'm running ImageJ 1.42q with java 1.6.0-openjdk 64 bit.
>>
>> Roger
>>
>>
>> On 09/22/2009 02:41 PM, Boris Epstein wrote:
>>  
>>    
>>> Which subrelease of ImageJ 1.42 are you running..,
>>>
>>> It is strange, we run it on 64-bit OpenSuSE 11.1 all the time and
>>> generally it seems to perform OK.
>>>
>>> Boris.
>>>
>>> Roger Koot wrote:
>>>  
>>>    
>>>      
>>>> Hi all,
>>>>
>>>> I'm trying to run ImageJ 1.42 on opensuse 11.1 x86_64. The program
>>>> starts just fine, I can load an image, but when I, for instance, change
>>>> the type of the image from, say, 8 bit to RGB, the trouble starts.
>>>> Whatever I try, I can't seem to close the window with the image. It pops
>>>> up a 'save file' dialog, but neither button works (yes/no/cancel).
>>>> Even shutting down ImageJ doesn't work because of the same bug/feature.
>>>> I also tried different java versions (java 1.5-sun, java-1.6-openjdk,
>>>> java-1.6-sun, java-1.7-icedtea), but that didn't help either.
>>>> I hope you can help me.
>>>>
>>>> TIA
>>>> Roger
>>>>  
>>>>    
>>>>      
>>>>        
>>>  
>>>    
>>>      
>
>