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Intensity vs Time plugin question

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Intensity vs Time plugin question

Zachary Freyberg
Dear all,
I am in the process of imaging large stacks of images where each slice is a
point in time. In the past, I used an older plugin called "intensity vs
time.class" However, it suddenly stopped working because I believe that it
is no longer compatible with the newest versions of imagej and fiji. Unlike
the "plot Z axis profile" function and the multimeasure function in the ROI
manager, the intensity vs time plugin allowed me to drag the ROI across
regions of the total image and dynamically acquire a new plot of intensity
versus time. Does anyone have a sense of what happened to make the old
plug-in stop working and/or whether I can acquire a newer similar plugin?
Any help is greatly appreciated.

Best regards,
Zach Freyberg

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Re: Intensity vs Time plugin question

Unruh, Jay-2
I have a plugin called "dynamic hs spectrum" that does what you want.  You can also subtract a background and observe ratios over time.  The plugin is available at http://research.stowers.org/imagejplugins

Jay

-----Original Message-----
From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of Zach Freyberg
Sent: Thursday, May 23, 2013 3:24 PM
To: [hidden email]
Subject: Intensity vs Time plugin question

Dear all,
I am in the process of imaging large stacks of images where each slice is a point in time. In the past, I used an older plugin called "intensity vs time.class" However, it suddenly stopped working because I believe that it is no longer compatible with the newest versions of imagej and fiji. Unlike the "plot Z axis profile" function and the multimeasure function in the ROI manager, the intensity vs time plugin allowed me to drag the ROI across regions of the total image and dynamically acquire a new plot of intensity versus time. Does anyone have a sense of what happened to make the old plug-in stop working and/or whether I can acquire a newer similar plugin?
Any help is greatly appreciated.

Best regards,
Zach Freyberg

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html