JAVA error when running parallel iterative deconvolution 3D plugin

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JAVA error when running parallel iterative deconvolution 3D plugin

Jackson Robertson
Hi, I downloaded the parallel iterative deconvolution plugin and when I try
to run it I am getting this error message.

java.lang.NoSuchMethodError:
edu.emory.mathcs.utils.ConcurrencyUtils.getNumberOfThreads()I
at
edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D$MainPanel.init(Unknown
Source)
at
edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D$MainPanel.<init>(Unknown
Source)
at
edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D.run(Unknown
Source)
at ij.IJ.runUserPlugIn(IJ.java:183)
at ij.IJ.runPlugIn(IJ.java:150)
at ij.Executer.runCommand(Executer.java:124)
at ij.Executer.run(Executer.java:61)
at java.lang.Thread.run(Thread.java:619)

Can anyone on this list please help me figure this one out / does anyone
here know what is wrong and why the plugin isn't working? I'm using the
latest versions of Java, Imagej, and the plugin.

Thanks for any help with this and please let me know if you need any other
information from me about this error.
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Re: JAVA error when running parallel iterative deconvolution 3D plugin

Piotr Wendykier-2
This type of error suggest that you have an outdated version of
Parallel Colt somewhere in the plugins directory.
The solution to this problem has been discussed already on this
mailing list. See for example:

http://imagej.588099.n2.nabble.com/JAVA-error-messages-td6238872.html

Piotr



On Thu, May 26, 2011 at 2:29 PM, Jackson Robertson
<[hidden email]> wrote:

> Hi, I downloaded the parallel iterative deconvolution plugin and when I try
> to run it I am getting this error message.
>
> java.lang.NoSuchMethodError:
> edu.emory.mathcs.utils.ConcurrencyUtils.getNumberOfThreads()I
> at
> edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D$MainPanel.init(Unknown
> Source)
> at
> edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D$MainPanel.<init>(Unknown
> Source)
> at
> edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D.run(Unknown
> Source)
> at ij.IJ.runUserPlugIn(IJ.java:183)
> at ij.IJ.runPlugIn(IJ.java:150)
> at ij.Executer.runCommand(Executer.java:124)
> at ij.Executer.run(Executer.java:61)
> at java.lang.Thread.run(Thread.java:619)
>
> Can anyone on this list please help me figure this one out / does anyone
> here know what is wrong and why the plugin isn't working? I'm using the
> latest versions of Java, Imagej, and the plugin.
>
> Thanks for any help with this and please let me know if you need any other
> information from me about this error.
>
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Re: JAVA error when running parallel iterative deconvolution 3D plugin

Jackson Robertson
Thanks. I was able to get it to work for me finally.

Jackson


On Thu, May 26, 2011 at 12:22 PM, Piotr Wendykier <[hidden email]
> wrote:

> This type of error suggest that you have an outdated version of
> Parallel Colt somewhere in the plugins directory.
> The solution to this problem has been discussed already on this
> mailing list. See for example:
>
> http://imagej.588099.n2.nabble.com/JAVA-error-messages-td6238872.html
>
> Piotr
>
>
>
> On Thu, May 26, 2011 at 2:29 PM, Jackson Robertson
> <[hidden email]> wrote:
> > Hi, I downloaded the parallel iterative deconvolution plugin and when I
> try
> > to run it I am getting this error message.
> >
> > java.lang.NoSuchMethodError:
> > edu.emory.mathcs.utils.ConcurrencyUtils.getNumberOfThreads()I
> > at
> >
> edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D$MainPanel.init(Unknown
> > Source)
> > at
> >
> edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D$MainPanel.<init>(Unknown
> > Source)
> > at
> >
> edu.emory.mathcs.restoretools.iterative.ParallelIterativeDeconvolution3D.run(Unknown
> > Source)
> > at ij.IJ.runUserPlugIn(IJ.java:183)
> > at ij.IJ.runPlugIn(IJ.java:150)
> > at ij.Executer.runCommand(Executer.java:124)
> > at ij.Executer.run(Executer.java:61)
> > at java.lang.Thread.run(Thread.java:619)
> >
> > Can anyone on this list please help me figure this one out / does anyone
> > here know what is wrong and why the plugin isn't working? I'm using the
> > latest versions of Java, Imagej, and the plugin.
> >
> > Thanks for any help with this and please let me know if you need any
> other
> > information from me about this error.
> >
>