Running coloc2 in a script?

[Kurt Thorn]

Hi All -

I'm trying to analyze the colocalization present of a large number of
images so I'm trying to figure out how to call the coloc2 plugin in a
script in such a way that I can get access to the returned Manders
coefficients in my script.

I have a couple hundred images, so what I'd like to do is loop over all
of them, determining appropriate ROIs, calling coloc2 for each two
channel image for the current ROI, and then record the returned Manders
coefficients associated with that image and ROI.  Any help would be most
appreciated.  I'm still pretty new to ImageJ scripting, so it's quite
likely I'm overlooking something.

Thanks,
Kurt