Hi,
The confocal microscopy set up that I am using in my experiments can save images only in TIFF's.. But the code that I have written in Matlab to stitch images works with JPG's. I know that you can open a TIFF image in ImageJ and then save as a JPG. Can one of you send me a macro to do this operation for all the images in a particular directory. I need ImageJ to open each and every image in a given directory and save those images as JPG's. I am novice as far as using the software or writing the macro for that matter. Hope to hear a reply soon. Thanks a bunch in advance, Vishwa |
> The confocal microscopy set up that I am using in my
> experiments can save images only in TIFF's.. But the code > that I have written in Matlab to stitch images works with > JPG's. I know that you can open a TIFF image in ImageJ and > then save as a JPG. Can one of you send me a macro to do > this operation for all the images in a particular directory. > I need ImageJ to open each and every image in a given > directory and save those images as JPG's. I am novice as far > as using the software or writing the macro for that matter. > Hope to hear a reply soon. The BatchConvert macro at "http://rsb.info.nih.gov/ij/macros/BatchConvert.txt" will convert a folder of TIFFs to a folder of JPEGs. -wayne |
In reply to this post by Vishwanath Somashekar
Hi,
if you use a PC, IrfanView's batch processing could also do the job. http://www.irfanview.com/ Guenter ------------------------------------------ Dr. Guenter Giese Light Microscopy Facility Manager Dept. of Biomedical Optics, MPI fuer Medizinische Forschung Jahnstr. 29, D-69120 Heidelberg, Germany Phone (+49) 6221-486-360 (Fax: -325) e-mail: [hidden email] http://lightmicro.mpimf-heidelberg.mpg.de -----Ursprüngliche Nachricht----- Von: ImageJ Interest Group [mailto:[hidden email]] Im Auftrag von Vishwanath Somashekar Gesendet: Wednesday, 12 October, 2005 18:50 An: [hidden email] Betreff: Saving Tiff's as JPEG Hi, The confocal microscopy set up that I am using in my experiments can save images only in TIFF's.. But the code that I have written in Matlab to stitch images works with JPG's. I know that you can open a TIFF image in ImageJ and then save as a JPG. Can one of you send me a macro to do this operation for all the images in a particular directory. I need ImageJ to open each and every image in a given directory and save those images as JPG's. I am novice as far as using the software or writing the macro for that matter. Hope to hear a reply soon. Thanks a bunch in advance, Vishwa |
And if you use a Mac, Graphic Converter can do almost anything with
any graphic file format and convert it to any other graphic format. And it can do any of this in batch mode. See www.lemkesoft.de Phil On Oct 12, 2005, at 11:01 AM, Guenter Giese wrote: > Hi, > > if you use a PC, IrfanView's batch processing could also do the job. > http://www.irfanview.com/ > > Guenter > > > ------------------------------------------ > Dr. Guenter Giese > Light Microscopy Facility Manager > Dept. of Biomedical Optics, MPI fuer Medizinische Forschung > Jahnstr. 29, D-69120 Heidelberg, Germany > Phone (+49) 6221-486-360 (Fax: -325) > e-mail: [hidden email] > http://lightmicro.mpimf-heidelberg.mpg.de > -----Ursprüngliche Nachricht----- > Von: ImageJ Interest Group [mailto:[hidden email]] Im Auftrag von > Vishwanath Somashekar > Gesendet: Wednesday, 12 October, 2005 18:50 > An: [hidden email] > Betreff: Saving Tiff's as JPEG > > Hi, > The confocal microscopy set up that I am using in my experiments > can save > images only in TIFF's.. But the code that I have written in Matlab > to stitch > images works with JPG's. I know that you can open a TIFF image in > ImageJ and > then save as a JPG. Can one of you send me a macro to do this > operation for > all the images in a particular directory. I need ImageJ to open > each and > every image in a given directory and save those images as JPG's. I > am novice > as far as using the software or writing the macro for that matter. > Hope to > hear a reply soon. > Thanks a bunch in advance, > Vishwa > |
In reply to this post by Vishwanath Somashekar
Why don't you read directly the tiff image in
Matlab? Olivier ___________________________ Olivier Salvado Biomedical Engineering Department -----Original Message----- From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of Vishwanath Somashekar Sent: Wednesday, October 12, 2005 12:50 PM To: [hidden email] Subject: Saving Tiff's as JPEG Hi, The confocal microscopy set up that I am using in my experiments can save images only in TIFF's.. But the code that I have written in Matlab to stitch images works with JPG's. I know that you can open a TIFF image in ImageJ and then save as a JPG. Can one of you send me a macro to do this operation for all the images in a particular directory. I need ImageJ to open each and every image in a given directory and save those images as JPG's. I am novice as far as using the software or writing the macro for that matter. Hope to hear a reply soon. Thanks a bunch in advance, Vishwa |
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