TrakEM2 Montage of differently scaled images

[Christopher Arnold]

Hello,

I want to display differently scaled images in the same layer.  
My aim is to integrate an overview series, acquired at a magnification of 12k, in an already existing and edited (transformed, segmented) project of a high resolution stack (mag. 20k).
I tried to align the images with the montage function, but failed until now.

Does anyone have a suggestion how to manage this issue? Is there a possibility to align these images in one layer with landmarks?

Thanks in advance.

Best
Christopher

[Albert Cardona-2]

2013/3/18 Christopher Arnold <[hidden email]>

> Hello,
>
> I want to display differently scaled images in the same layer.
> My aim is to integrate an overview series, acquired at a magnification of
> 12k, in an already existing and edited (transformed, segmented) project of
> a
> high resolution stack (mag. 20k).
> I tried to align the images with the montage function, but failed until
> now.
>
> Does anyone have a suggestion how to manage this issue? Is there a
> possibility to align these images in one layer with landmarks?
>
> Thanks in advance.
>
> Best
> Christopher
>

Dear Christopher,

in the linear registration options, use a similarity transform or an affine
transform--both include scaling.

Best,

Albert


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