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Working with Leica Image Files

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Working with Leica Image Files

JimmiB
25 posts
Hi there,

Does anyone have a simple method for extracting timestamps for *.lif files?

I believe this may be possible using bio-formats but I haven't been able to
get anything to work.

For completeness
each *.lif file contains multiple image stacks derived from a
multi-dimensional type acquisition series.

Any help would be much appreciated.

Cheers,
James

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html
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Re: Working with Leica Image Files

ctrueden
1670 posts
Hi James,

> Does anyone have a simple method for extracting timestamps for *.lif
> files?

Does this macro accomplish what you are looking for?
https://github.com/openmicroscopy/bioformats/blob/v4.4.6/components/loci-plugins/utils/macros/planeTimings.txt

Regards,
Curtis


On Mon, Feb 25, 2013 at 4:58 PM, James Burchfield <
[hidden email]> wrote:

> Hi there,
>
> Does anyone have a simple method for extracting timestamps for *.lif files?
>
> I believe this may be possible using bio-formats but I haven't been able to
> get anything to work.
>
> For completeness
> each *.lif file contains multiple image stacks derived from a
> multi-dimensional type acquisition series.
>
> Any help would be much appreciated.
>
> Cheers,
> James
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html