align 16 bit images

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align 16 bit images

Virginia Borroni
Hi all!
Anyone knows a plugin to align 16 bit images?
Thanks a lot!
Virginia


Dra. Maria Virginia Borroni
INIBIBB
C La Carrindanga Km 7 CC857. B8000FWB.
Bahia Blanca. Buenos Aires. Argentina.
Tel.#: 54-291-4861201. interno 127
Fax#: 54-291-4861200
[hidden email]


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Re: align 16 bit images

Michael Schmid
Hi Virginia,

as far as I can say, both StackReg/Turboreg as well as bUnwarpJ should work with 16-bit images.
Your choice will depend on whether you need nonlinear distortions (bUnwarpJ) or not.

Michael
________________________________________________________________
On Jul 13, 2012, at 15:21, Virginia Borroni wrote:

> Hi all!
> Anyone knows a plugin to align 16 bit images?
> Thanks a lot!
> Virginia
>
>
> Dra. Maria Virginia Borroni
> INIBIBB
> C La Carrindanga Km 7 CC857. B8000FWB.
> Bahia Blanca. Buenos Aires. Argentina.
> Tel.#: 54-291-4861201. interno 127
> Fax#: 54-291-4861200
> [hidden email]
>
>
> ----------------------------------------------------------------
> This message was sent using IMP, the Internet Messaging Program.
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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Re: align 16 bit images

Stephan Saalfeld
In reply to this post by Virginia Borroni
Hi Virginia,

all those

http://fiji.sc/wiki/index.php/Register_virtual_stack_slices

http://fiji.sc/wiki/index.php/Elastic_Alignment_and_Montage

http://fiji.sc/wiki/index.php/TrakEM2

can work with stacks of 16bit images forming virtual stacks, that is the
entire stack does not need to fit into RAM.

Good luck,
Stephan




On Fri, 2012-07-13 at 10:21 -0300, Virginia Borroni wrote:

> Hi all!
> Anyone knows a plugin to align 16 bit images?
> Thanks a lot!
> Virginia
>
>
> Dra. Maria Virginia Borroni
> INIBIBB
> C La Carrindanga Km 7 CC857. B8000FWB.
> Bahia Blanca. Buenos Aires. Argentina.
> Tel.#: 54-291-4861201. interno 127
> Fax#: 54-291-4861200
> [hidden email]
>
>
> ----------------------------------------------------------------
> This message was sent using IMP, the Internet Messaging Program.
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html