cell counter plugin
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Hello,
First my complements on the ImageJ program. I have just discovered it, but I like it very much already. There is however a problem I am experiencing with the cell counter plugin by Kurt De Vos. The problem occurs when trying to run the plugin in ImageJ. I click on 'Cell counter' under Plugin and the Cell counter window opens in a way that I can just see a piece of the left side. The rest of the window runs off the screen and I cannot move it, henceforth I cannot see it nor use it. This plugin seems to be perfectly suited for an operation I would like to perform, namely count objects by clicking. Has anybody has similar problems with this plugin? I am running: Windows XP Java(TM) 2 Platform, Standard Edition Runtime Environment, Version 5.0 and ImageJ 1.36b Kind regards, Edwin Commandeur |
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I know of this problem on some systems. I will fix it asap.
kurt On 27 Apr 2006, at 10:53, Commandeur wrote: > Hello, > > First my complements on the ImageJ program. I have just > discovered it, but I like it very much already. > > There is however a problem I am experiencing with the cell > counter plugin by Kurt De Vos. The problem occurs when > trying to run the plugin in ImageJ. I click on 'Cell > counter' under Plugin and the Cell counter window opens in > a way that I can just see a piece of the left side. The > rest of the window runs off the screen and I cannot move > it, henceforth I cannot see it nor use it. > > This plugin seems to be perfectly suited for an operation > I would like to perform, namely count objects by clicking. > > Has anybody has similar problems with this plugin? I am > running: > Windows XP > Java(TM) 2 Platform, Standard Edition Runtime Environment, > Version 5.0 > and > ImageJ 1.36b > > Kind regards, > Edwin Commandeur > > > > > *--*--*--*--*--*--*--*--*--*--*--*--*--* University of Sheffield Academic Neurology Unit Division of Genomic Medicine E Floor, Medical School Beech Hill Road Sheffield S10 2RX United Kingdom Tel: ++44 (0) 114 271 2473 Fax: ++44 (0) 114 226 1201 Email: [hidden email] *--*--*--*--*--*--*--*--*--*--*--*--*--* |
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In reply to this post by Commandeur
Hi Kurt,
Thank you for your kind and fast reply. The plugin you mailed indeed places the cell counter window in the upper left corner. I had already installed WCIF ImageJ, which apparently uses an older version of the cell counter plugin. The newer plugin is definitely nicer. Twice as much types available and better output! Thanks again, Edwin > I know of this problem on some systems. I will fix it asap. > kurt > > On 27 Apr 2006, at 10:53, Commandeur wrote: > > > Hello, > > > > First my complements on the ImageJ program. I have just > > discovered it, but I like it very much already. > > > > There is however a problem I am experiencing with the > > counter plugin by Kurt De Vos. The problem occurs when > > trying to run the plugin in ImageJ. I click on 'Cell > > counter' under Plugin and the Cell counter window opens in > > a way that I can just see a piece of the left side. The > > rest of the window runs off the screen and I cannot move > > it, henceforth I cannot see it nor use it. > > > > This plugin seems to be perfectly suited for an operation > > I would like to perform, namely count objects by clicking. > > > > Has anybody has similar problems with this plugin? I am > > running: > > Windows XP > > Java(TM) 2 Platform, Standard Edition Runtime Environment, > > Version 5.0 > > and > > ImageJ 1.36b > > > > Kind regards, > > Edwin Commandeur > > > > > > > > > > > > *--*--*--*--*--*--*--*--*--*--*--*--*--* > University of Sheffield > Academic Neurology Unit > Division of Genomic Medicine > E Floor, Medical School > Beech Hill Road > Sheffield > S10 2RX > United Kingdom > > Tel: ++44 (0) 114 271 2473 > Fax: ++44 (0) 114 226 1201 > Email: [hidden email] > *--*--*--*--*--*--*--*--*--*--*--*--*--* > |
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In reply to this post by Commandeur
There is a work-around that should let you use the cell-counter until Kurt
has an opportunity to develop a solution. You should be able to see the Java Cup menu at the top left of the plugin on the right edge of your screen. Click on it and select Move. Then, use the left-arrow key to move the main body of the plug-in dialog into view on the screen. I think you'll find it to be an extremely useful plug-in. HTH, Rob ____________________________ Robert W. Baer, Ph.D. Associate Professor Department of Physiology A. T. Still University of Health Science 800 W. Jefferson St. Kirksville, MO 63501-1497 USA ----- Original Message ----- From: "Commandeur" <[hidden email]> To: <[hidden email]> Sent: Thursday, April 27, 2006 5:53 AM Subject: cell counter plugin > Hello, > > First my complements on the ImageJ program. I have just > discovered it, but I like it very much already. > > There is however a problem I am experiencing with the cell > counter plugin by Kurt De Vos. The problem occurs when > trying to run the plugin in ImageJ. I click on 'Cell > counter' under Plugin and the Cell counter window opens in > a way that I can just see a piece of the left side. The > rest of the window runs off the screen and I cannot move > it, henceforth I cannot see it nor use it. > > This plugin seems to be perfectly suited for an operation > I would like to perform, namely count objects by clicking. > > Has anybody has similar problems with this plugin? I am > running: > Windows XP > Java(TM) 2 Platform, Standard Edition Runtime Environment, > Version 5.0 > and > ImageJ 1.36b > > Kind regards, > Edwin Commandeur > > > > > > |
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In reply to this post by Commandeur
Hi Edwin,
Have a look at the documentation; e.g you can now add as many types you want, or remove them if needed. kurt On 27 Apr 2006, at 12:47, Commandeur wrote: > Hi Kurt, > > Thank you for your kind and fast reply. The plugin you > mailed indeed places the cell counter window in the upper > left corner. > > I had already installed WCIF ImageJ, which apparently uses > an older version of the cell counter plugin. > > The newer plugin is definitely nicer. Twice as much types > available and better output! > > Thanks again, > Edwin > > >> I know of this problem on some systems. I will fix it > asap. >> kurt >> >> On 27 Apr 2006, at 10:53, Commandeur wrote: >> >>> Hello, >>> >>> First my complements on the ImageJ program. I have just >>> discovered it, but I like it very much already. >>> >>> There is however a problem I am experiencing with the > cell >>> counter plugin by Kurt De Vos. The problem occurs when >>> trying to run the plugin in ImageJ. I click on 'Cell >>> counter' under Plugin and the Cell counter window > opens in >>> a way that I can just see a piece of the left side. The >>> rest of the window runs off the screen and I cannot > move >>> it, henceforth I cannot see it nor use it. >>> >>> This plugin seems to be perfectly suited for an > operation >>> I would like to perform, namely count objects by > clicking. >>> >>> Has anybody has similar problems with this plugin? I am >>> running: >>> Windows XP >>> Java(TM) 2 Platform, Standard Edition Runtime > Environment, >>> Version 5.0 >>> and >>> ImageJ 1.36b >>> >>> Kind regards, >>> Edwin Commandeur >>> >>> >>> >>> >>> >> >> *--*--*--*--*--*--*--*--*--*--*--*--*--* >> University of Sheffield >> Academic Neurology Unit >> Division of Genomic Medicine >> E Floor, Medical School >> Beech Hill Road >> Sheffield >> S10 2RX >> United Kingdom >> >> Tel: ++44 (0) 114 271 2473 >> Fax: ++44 (0) 114 226 1201 >> Email: [hidden email] >> *--*--*--*--*--*--*--*--*--*--*--*--*--* >> *--*--*--*--*--*--*--*--*--*--*--*--*--* University of Sheffield Academic Neurology Unit Division of Genomic Medicine E Floor, Medical School Beech Hill Road Sheffield S10 2RX United Kingdom Tel: ++44 (0) 114 271 2473 Fax: ++44 (0) 114 226 1201 Email: [hidden email] *--*--*--*--*--*--*--*--*--*--*--*--*--* |
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In reply to this post by Commandeur
Hi Kurt,
Many thanks. It's really nice that it's possible to add and remove types just by a click on the button! Greetings, Edwin > Hi Edwin, > > Have a look at the documentation; e.g you can now add as many types > you want, or remove them if needed. > > kurt > > On 27 Apr 2006, at 12:47, Commandeur wrote: > > > Hi Kurt, > > > > Thank you for your kind and fast reply. The plugin you > > mailed indeed places the cell counter window in the > > left corner. > > > > I had already installed WCIF ImageJ, which apparently uses > > an older version of the cell counter plugin. > > > > The newer plugin is definitely nicer. Twice as much types > > available and better output! > > > > Thanks again, > > Edwin > > > > > >> I know of this problem on some systems. I will fix it > > asap. > >> kurt > >> > >> On 27 Apr 2006, at 10:53, Commandeur wrote: > >> > >>> Hello, > >>> > >>> First my complements on the ImageJ program. I have > >>> discovered it, but I like it very much already. > >>> > >>> There is however a problem I am experiencing with the > > cell > >>> counter plugin by Kurt De Vos. The problem occurs when > >>> trying to run the plugin in ImageJ. I click on 'Cell > >>> counter' under Plugin and the Cell counter window > > opens in > >>> a way that I can just see a piece of the left side. The > >>> rest of the window runs off the screen and I cannot > > move > >>> it, henceforth I cannot see it nor use it. > >>> > >>> This plugin seems to be perfectly suited for an > > operation > >>> I would like to perform, namely count objects by > > clicking. > >>> > >>> Has anybody has similar problems with this plugin? I > >>> running: > >>> Windows XP > >>> Java(TM) 2 Platform, Standard Edition Runtime > > Environment, > >>> Version 5.0 > >>> and > >>> ImageJ 1.36b > >>> > >>> Kind regards, > >>> Edwin Commandeur > >>> > >>> > >>> > >>> > >>> > >> > >> *--*--*--*--*--*--*--*--*--*--*--*--*--* > >> University of Sheffield > >> Academic Neurology Unit > >> Division of Genomic Medicine > >> E Floor, Medical School > >> Beech Hill Road > >> Sheffield > >> S10 2RX > >> United Kingdom > >> > >> Tel: ++44 (0) 114 271 2473 > >> Fax: ++44 (0) 114 226 1201 > >> Email: [hidden email] > >> *--*--*--*--*--*--*--*--*--*--*--*--*--* > >> > > *--*--*--*--*--*--*--*--*--*--*--*--*--* > University of Sheffield > Academic Neurology Unit > Division of Genomic Medicine > E Floor, Medical School > Beech Hill Road > Sheffield > S10 2RX > United Kingdom > > Tel: ++44 (0) 114 271 2473 > Fax: ++44 (0) 114 226 1201 > Email: [hidden email] > *--*--*--*--*--*--*--*--*--*--*--*--*--* > |
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