You can use a simple macro to save the images in a stack into txt
files, something like this:
for (i=0; i<nSlices;i++){
setSlice(i+1);
saveAs("Text Image","/Path...///Stack"+i+".txt");
}
change the Path...// into the path where your images will be saved.
Gary.
On Feb 6, 2006, at 6:48 PM, Naomi Barth wrote:
> I need the 2-pt stats of the whole stack. I will need to
> correlate pts
> from one image to pts in another
>
>
> On 2/6/06, H. Gluender <
[hidden email]> wrote:
>>
>>> For my research I need to convert a set of 8-bit images into txt
>> files. The
>>> stack of images make up a three dimensional image, there are
>>> about 150
>>> images per stack. I have a program that will read read this txt
>>> file
>> and
>>> do 2-pt statistics on the set. Because I am dealing with so many
>>> large
>>> images in each data set, It would take my program too long to
>>> open up 150
>>> txt files. So my question is does any one know how to turn a
>>> stack of
>>> images into a single txt file, that I will be able to tell the
>>> difference
>>> between the x, y, and z pixels. If not, does anyone know how to
>>> turn a
>>> bunch of images into txt files at once, so I don't have to do
>>> that by
>> hand.
>>>
>>> Thank you
>>> -Naomi
>>
>> Naomi,
>>
>> do you need 2-point statistics of the volume (stack) or of each of
>> the stack's images?
>>
>> If the latter is what you need, why not compute the 2-point
>> statistics of every image in ImageJ? For instance, you may use the
>> autocorrelation function of every image which in fact is the
>> histogram of all 2-point products.
>>
>> HTH
>> --
>>
>>
>> Herbie
>>
>> ------------------------
>>
>> <
http://www.gluender.de>
>>
>
>
Locked
