how can i import imagej libraries in my project?
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Hello,
I want to use imagej libraries for my project, but I dont know how to call them within the application. For example, I want to use threshold from imagej, how do I call it? Thanks |
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Hi,
If your application is in Java, just use the ImageJ classes like any other Java API. You can find the Javadocs online at: http://rsb.info.nih.gov/ij/developer/api/index.html and you can browse the source code at: http://rsb.info.nih.gov/ij/developer/source/index.html If you want to write plugins, check out Werner Bailer's plugins tutorial: http://mtd.fh-hagenberg.at/depot/imaging/imagej/ For more information, see the ImageJ web site's developer resources page: http://rsb.info.nih.gov/ij/developer/index.html -Curtis On 8/3/07, mobitel <[hidden email]> wrote: > Hello, > > I want to use imagej libraries for my project, but I dont know how to call > them within the application. > For example, I want to use threshold from imagej, how do I call it? > > Thanks > -- > View this message in context: http://www.nabble.com/how-can-i-import-imagej-libraries-in-my-project--tf4207392.html#a11968657 > Sent from the ImageJ mailing list archive at Nabble.com. > |
Re: how can i import imagej libraries in my project?
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In reply to this post by mobitel
Hi. Mostly it's a matter of including the class files on the classpath.
Are you using a particular IDE. --- Mike -----Original Message----- From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of mobitel Sent: Friday, August 03, 2007 12:40 PM To: [hidden email] Subject: how can i import imagej libraries in my project? Hello, I want to use imagej libraries for my project, but I dont know how to call them within the application. For example, I want to use threshold from imagej, how do I call it? Thanks -- View this message in context: http://www.nabble.com/how-can-i-import-imagej-libraries-in-my-project--t f4207392.html#a11968657 Sent from the ImageJ mailing list archive at Nabble.com. |
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In reply to this post by ctrueden
Hello,
Is it possible to give me an example, I do work with java for years, but NEVER needed to import any kind of API or 3rd party class, or library.
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In reply to this post by Sullivan, Michael J (College of Med.)
Can I have an example?
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Re: how can i import imagej libraries in my project?
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I use NetBeans (www.netbeans.org) as my IDE. There is a example of using it at: http://rsb.info.nih.gov/ij/developer/NBTutorial.html -----Original Message----- From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of mobitel Sent: Wednesday, August 08, 2007 8:50 AM To: [hidden email] Subject: Re: how can i import imagej libraries in my project? Can I have an example? Sullivan, Michael J (College of Med.) wrote: > > Hi. Mostly it's a matter of including the class files on the classpath. > Are you using a particular IDE. --- Mike > > -----Original Message----- > From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of > mobitel > Sent: Friday, August 03, 2007 12:40 PM > To: [hidden email] > Subject: how can i import imagej libraries in my project? > > Hello, > > I want to use imagej libraries for my project, but I dont know how to > call > them within the application. > For example, I want to use threshold from imagej, how do I call it? > > Thanks > -- > View this message in context: > > f4207392.html#a11968657 > Sent from the ImageJ mailing list archive at Nabble.com. > > -- View this message in context: http://www.nabble.com/how-can-i-import-imagej-libraries-in-my-project--t f4207392.html#a12052535 Sent from the ImageJ mailing list archive at Nabble.com. |
Re: how can i import imagej libraries in my project?
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Thnks akhila
I knew you have a good taste Like me :))) n Nikolaos Giagtzoglou, PhD Department of Molecular and Human Genetics Howard Hughes Medical Institute Baylor College of Medicine Mail Stop BCM-235 One Baylor Plaza, Room T630 Houston, TX 77030, U.S.A. Tel: 001 (713) 798-8840 Fax: 001 (713) 798 3694 http://flypush.imgen.bcm.tmc.edu/lab/ -----Original Message----- From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of Sullivan, Michael J Sent: Wednesday, August 08, 2007 11:06 AM To: [hidden email] Subject: Re: how can i import imagej libraries in my project? I use NetBeans (www.netbeans.org) as my IDE. There is a example of using it at: http://rsb.info.nih.gov/ij/developer/NBTutorial.html -----Original Message----- From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of mobitel Sent: Wednesday, August 08, 2007 8:50 AM To: [hidden email] Subject: Re: how can i import imagej libraries in my project? Can I have an example? Sullivan, Michael J (College of Med.) wrote: > > Hi. Mostly it's a matter of including the class files on the classpath. > Are you using a particular IDE. --- Mike > > -----Original Message----- > From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of > mobitel > Sent: Friday, August 03, 2007 12:40 PM > To: [hidden email] > Subject: how can i import imagej libraries in my project? > > Hello, > > I want to use imagej libraries for my project, but I dont know how to > call them within the application. > For example, I want to use threshold from imagej, how do I call it? > > Thanks > -- > View this message in context: > > f4207392.html#a11968657 > Sent from the ImageJ mailing list archive at Nabble.com. > > -- View this message in context: http://www.nabble.com/how-can-i-import-imagej-libraries-in-my-project--t f4207392.html#a12052535 Sent from the ImageJ mailing list archive at Nabble.com. |
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In reply to this post by mobitel
Hi,
The key is to include ij.jar in your class path. But how to do so depends on your environment. With the Eclipse IDE, right-click your project, hit Properties, choose the Java Build Path option, click the Libraries tab, then click the Add JARs button to include ij.jar. If you work from the command line, you can set the CLASSPATH environment variable to include ij.jar. On Windows, right-click My Computer, choose properties, Advanced tab, click Environment Variables, and create one called CLASSPATH with the value "/path/to/ij.jar" (without the quotes), where "/path/to" is the directory containing the JAR file. On Linux, add the line "export CLASSPATH=/path/to/ij.jar" to your .bashrc or other relevant configuration file. On Mac OS X, add it to your .profile. Alternately, you can compile a program with a particular class path like this: javac -cp /path/to/ij.jar MyProgram.java If you have multiple dependencies (i.e., multiple 3rd party JARs), you can include them all by separating their paths with colons (use semicolons on Windows). E.g.: javac -cp /path/to/ij.jar:/path/to/anotherLib.jar MyProgram.java Another option is to use Ant to create a build script to compile and run your program from the command line, rather than modify the CLASSPATH environment variable directly. The software my group develops (http://loci.wisc.edu/software/) uses this method to allow users to check out our codebase from our Subversion repository and build it immediately without needing to muck around with the class path. -Curtis On 8/8/07, mobitel <[hidden email]> wrote: > Hello, > > Is it possible to give me an example, I do work with java for years, but > NEVER needed to import any kind of API or 3rd party class, or library. > > > > Curtis Rueden wrote: > > > > Hi, > > > > If your application is in Java, just use the ImageJ classes like any > > other Java API. You can find the Javadocs online at: > > > > http://rsb.info.nih.gov/ij/developer/api/index.html > > > > and you can browse the source code at: > > > > http://rsb.info.nih.gov/ij/developer/source/index.html > > > > If you want to write plugins, check out Werner Bailer's plugins tutorial: > > > > http://mtd.fh-hagenberg.at/depot/imaging/imagej/ > > > > For more information, see the ImageJ web site's developer resources page: > > > > http://rsb.info.nih.gov/ij/developer/index.html > > > > -Curtis > > > > On 8/3/07, mobitel <[hidden email]> wrote: > >> Hello, > >> > >> I want to use imagej libraries for my project, but I dont know how to > >> call > >> them within the application. > >> For example, I want to use threshold from imagej, how do I call it? > >> > >> Thanks > >> -- > >> View this message in context: > >> http://www.nabble.com/how-can-i-import-imagej-libraries-in-my-project--tf4207392.html#a11968657 > >> Sent from the ImageJ mailing list archive at Nabble.com. > >> > > > > > > -- > View this message in context: http://www.nabble.com/how-can-i-import-imagej-libraries-in-my-project--tf4207392.html#a12052523 > Sent from the ImageJ mailing list archive at Nabble.com. > |
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Hello,
I use JBuilder and I did it! What's the next step, how do I call, say threshold?
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In reply to this post by Sullivan, Michael J (College of Med.)
Hello,
I use JBuilder and I did it! What's the next step, how do I call, say threshold?
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