measuring fluorescent intensity in 3D

[Cole, Richard W (HEALTH)]

Imagers,

Is there any way to measure the total fluoresces in a ROI in an image stack?

Thanks

Rich



Richard Cole
Research Scientist V
Director: Advanced Light Microscopy & Image Analysis Core
Wadsworth Center
 
Research Assistant Professor
Dept. of Biomedical Sciences
School of Public Health State University of New York

120 New Scotland Avenue, Albany N.Y. 12208
518-474-7048 Phone
518-408-1730 Fax

Website www.wadsworth.org/cores/alm/index.htm

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[Thomas Boudier-4]

Hi Richard,

Look for the plugins about 3D measurements :

http://imagejdocu.tudor.lu/doku.php?id=plugin:stacks:3d_roi_manager:start

and

http://imagejdocu.tudor.lu/doku.php?id=plugin:analysis:3d_object_counter:start

Best,

Thomas


On 10/10/2015 02:35, Cole, Richard (HEALTH) wrote:

> Imagers,
>
> Is there any way to measure the total fluoresces in a ROI in an image stack?
>
> Thanks
>
> Rich
>
>
>
> Richard Cole
> Research Scientist V
> Director: Advanced Light Microscopy & Image Analysis Core
> Wadsworth Center
>  
> Research Assistant Professor
> Dept. of Biomedical Sciences
> School of Public Health State University of New York
>
> 120 New Scotland Avenue, Albany N.Y. 12208
> 518-474-7048 Phone
> 518-408-1730 Fax
>
> Website www.wadsworth.org/cores/alm/index.htm
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
>

--
  /***************************************************************/
       Thomas Boudier, Associate Professor, UPMC,
       Université Pierre et Marie Curie, Paris, France.
       BioInformatics Institute (BII)/IPAL, Singapore.
/**************************************************************/

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