problem with zvi files

[Sho Fujisawa]

I'm having issues opening zvi files with Bio-Formats plugin.

The file contains two channels: a nuclear DAPI image and blood vessels in green (Meca32). Unfortunately, the listserver won't let me attach the said zvi file...

However, when I open it with Fiji/ImageJ, my green channel looks exactly like nuclear DAPI, just in green color.

I have the latest version, fully updated. Same thing happens in both "modern" and "legacy" modes. I used to be able to open zvi files fine. Did something happen??

You can contact me personally, and I can attach the zvi file for you to take a look at...

Sho Fujisawa
Molecular Cytology Core Facility
Memorial Sloan-Kettering Cancer Center
415 East 68th St. ZRC-1840
New York, NY 10065
[phone], x2186
[hidden email]<mailto:[hidden email]>



 
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[Melissa Linkert-2]

Hi Sho,

> I'm having issues opening zvi files with Bio-Formats plugin.
>
> The file contains two channels: a nuclear DAPI image and blood vessels in green (Meca32). Unfortunately, the listserver won't let me attach the said zvi file...
>
> However, when I open it with Fiji/ImageJ, my green channel looks exactly like nuclear DAPI, just in green color.
>
> I have the latest version, fully updated. Same thing happens in both "modern" and "legacy" modes. I used to be able to open zvi files fine. Did something happen??
>

This was a bug in Bio-Formats, and was recently fixed.  The 5.0.0-beta1
version and "trunk" builds available from:

http://www.openmicroscopy.org/site/products/bio-formats/downloads

should not have this problem.

Regards,
-Melissa

On Tue, Jul 30, 2013 at 05:13:33PM +0000, Sho Fujisawa wrote:

> I'm having issues opening zvi files with Bio-Formats plugin.
>
> The file contains two channels: a nuclear DAPI image and blood vessels in green (Meca32). Unfortunately, the listserver won't let me attach the said zvi file...
>
> However, when I open it with Fiji/ImageJ, my green channel looks exactly like nuclear DAPI, just in green color.
>
> I have the latest version, fully updated. Same thing happens in both "modern" and "legacy" modes. I used to be able to open zvi files fine. Did something happen??
>
> You can contact me personally, and I can attach the zvi file for you to take a look at...
>
> Sho Fujisawa
> Molecular Cytology Core Facility
> Memorial Sloan-Kettering Cancer Center
> 415 East 68th St. ZRC-1840
> New York, NY 10065
> [phone], x2186
> [hidden email]<mailto:[hidden email]>
>
>
>
>  
>      =====================================================================
>      
>      Please note that this e-mail and any files transmitted from
>      Memorial Sloan-Kettering Cancer Center may be privileged, confidential,
>      and protected from disclosure under applicable law. If the reader of
>      this message is not the intended recipient, or an employee or agent
>      responsible for delivering this message to the intended recipient,
>      you are hereby notified that any reading, dissemination, distribution,
>      copying, or other use of this communication or any of its attachments
>      is strictly prohibited.  If you have received this communication in
>      error, please notify the sender immediately by replying to this message
>      and deleting this message, any attachments, and all copies and backups
>      from your computer.
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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