quicktime write problem
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Several computers in my teaching lab have stopped exporting quicktime
movies from stacks. It worked all semester and also worked today with some stacks but not others. The error message is: quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers:7608000 at quicktime.std.StdQTException.checkError(StdQTException.java:38) at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) at QuickTime_Writer.run(QuickTime_Writer.java:86) at ij.IJ.runUserPlugIn(IJ.java:173) at ij.IJ.runPlugIn(IJ.java:139) at ij.Executer.runCommand(Executer.java:104) at ij.Executer.run(Executer.java:58) at java.lang.Thread.run(Thread.java:613) Can someone interpert this for me? Thanks- Dave Dr. David Knecht Department of Molecular and Cell Biology Co-head Flow Cytometry and Confocal Microscopy Facility U-3125 91 N. Eagleville Rd. University of Connecticut Storrs, CT 06269 860-486-2200 860-486-4331 (fax) |
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On May 6, 2009, at 12:34 PM, David Knecht wrote:
> Several computers in my teaching lab have stopped exporting quicktime > movies from stacks. It worked all semester and also worked today with > some stacks but not others. The error message is: > > quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers:7608000 > at quicktime.std.StdQTException.checkError(StdQTException.java:38) > at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) > at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) > at QuickTime_Writer.run(QuickTime_Writer.java:86) > at ij.IJ.runUserPlugIn(IJ.java:173) > at ij.IJ.runPlugIn(IJ.java:139) > at ij.Executer.runCommand(Executer.java:104) > at ij.Executer.run(Executer.java:58) > at java.lang.Thread.run(Thread.java:613) > > Can someone interpert this for me? Thanks- Dave You can get this error when you attempt to export a QuickTime move to a folder that has a name longer than 31 characters. -wayne |
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Wayne-
Is it possible for the QuickTime writer plugin to catch that exception and throw up a message to the user suggesting that name length of a directory might be a problem? Or are there just to many ways for that exception to arise to focus the user on that likely possibility. Thanks, Bill >On May 6, 2009, at 12:34 PM, David Knecht wrote: > >>Several computers in my teaching lab have stopped exporting >>quicktime movies from stacks. It worked all semester and also >>worked today with some stacks but not others. The error message is: >> >>quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers:7608000 >> at quicktime.std.StdQTException.checkError(StdQTException.java:38) >> at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) >> at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) >> at QuickTime_Writer.run(QuickTime_Writer.java:86) >> at ij.IJ.runUserPlugIn(IJ.java:173) >> at ij.IJ.runPlugIn(IJ.java:139) >> at ij.Executer.runCommand(Executer.java:104) >> at ij.Executer.run(Executer.java:58) >> at java.lang.Thread.run(Thread.java:613) >> >>Can someone interpert this for me? Thanks- Dave > >You can get this error when you attempt to export a QuickTime move >to a folder that has a name longer than 31 characters. > >-wayne |
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It does appear to be the name of hte file itself being longer than 32
characters. I thought the maximum filename length was 255 characters. What are the rules for file names? Dave On May 6, 2009, at 2:16 PM, Bill Mohler wrote: > Wayne- > > Is it possible for the QuickTime writer plugin to catch that > exception and throw up a message to the user suggesting that name > length of a directory might be a problem? Or are there just to many > ways for that exception to arise to focus the user on that likely > possibility. > > Thanks, > Bill > >> On May 6, 2009, at 12:34 PM, David Knecht wrote: >> >>> Several computers in my teaching lab have stopped exporting >>> quicktime movies from stacks. It worked all semester and also >>> worked today with some stacks but not others. The error message is: >>> >>> quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers: >>> 7608000 >>> at quicktime.std.StdQTException.checkError(StdQTException.java:38) >>> at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) >>> at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) >>> at QuickTime_Writer.run(QuickTime_Writer.java:86) >>> at ij.IJ.runUserPlugIn(IJ.java:173) >>> at ij.IJ.runPlugIn(IJ.java:139) >>> at ij.Executer.runCommand(Executer.java:104) >>> at ij.Executer.run(Executer.java:58) >>> at java.lang.Thread.run(Thread.java:613) >>> >>> Can someone interpert this for me? Thanks- Dave >> >> You can get this error when you attempt to export a QuickTime move >> to a folder that has a name longer than 31 characters. >> >> -wayne Dr. David Knecht Department of Molecular and Cell Biology Co-head Flow Cytometry and Confocal Microscopy Facility U-3125 91 N. Eagleville Rd. University of Connecticut Storrs, CT 06269 860-486-2200 860-486-4331 (fax) |
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In reply to this post by Bill Mohler
There is a new version of the QuickTime_Writer plugin at
http://rsb.info.nih.gov/ij/plugins/movie-writer.html that suggests that the length of the directory name might be the problem when a "fBsyErr" exception occurs. This version also adds support for hyperstacks. -wayne On May 6, 2009, at 2:16 PM, Bill Mohler wrote: > Wayne- > > Is it possible for the QuickTime writer plugin to catch that exception > and throw up a message to the user suggesting that name length of a > directory might be a problem? Or are there just to many ways for that > exception to arise to focus the user on that likely possibility. > > Thanks, > Bill > >> On May 6, 2009, at 12:34 PM, David Knecht wrote: >> >>> Several computers in my teaching lab have stopped exporting >>> quicktime movies from stacks. It worked all semester and also >>> worked today with some stacks but not others. The error message is: >>> >>> quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers: >>> 7608000 >>> at quicktime.std.StdQTException.checkError(StdQTException.java:38) >>> at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) >>> at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) >>> at QuickTime_Writer.run(QuickTime_Writer.java:86) >>> at ij.IJ.runUserPlugIn(IJ.java:173) >>> at ij.IJ.runPlugIn(IJ.java:139) >>> at ij.Executer.runCommand(Executer.java:104) >>> at ij.Executer.run(Executer.java:58) >>> at java.lang.Thread.run(Thread.java:613) >>> >>> Can someone interpert this for me? Thanks- Dave >> >> You can get this error when you attempt to export a QuickTime move to >> a folder that has a name longer than 31 characters. >> >> -wayne > |
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Thanks Wayne-
What exactly is the support for hyperstacks here? Does it write out separate movies for each channel or Z-stack? Or does it write a single movie from all dimensions of the hyperstack in a canonical order (eg CZT)? Bill >There is a new version of the QuickTime_Writer plugin at > > http://rsb.info.nih.gov/ij/plugins/movie-writer.html > >that suggests that the length of the directory name might be the >problem when a "fBsyErr" exception occurs. This version also adds >support for hyperstacks. > >-wayne > >On May 6, 2009, at 2:16 PM, Bill Mohler wrote: > >>Wayne- >> >>Is it possible for the QuickTime writer plugin to catch that >>exception and throw up a message to the user suggesting that name >>length of a directory might be a problem? Or are there just to >>many ways for that exception to arise to focus the user on that >>likely possibility. >> >>Thanks, >>Bill >> >>>On May 6, 2009, at 12:34 PM, David Knecht wrote: >>> >>>>Several computers in my teaching lab have stopped exporting >>>>quicktime movies from stacks. It worked all semester and also >>>>worked today with some stacks but not others. The error message >>>>is: >>>> >>>>quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers:7608000 >>>> at quicktime.std.StdQTException.checkError(StdQTException.java:38) >>>> at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) >>>> at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) >>>> at QuickTime_Writer.run(QuickTime_Writer.java:86) >>>> at ij.IJ.runUserPlugIn(IJ.java:173) >>>> at ij.IJ.runPlugIn(IJ.java:139) >>>> at ij.Executer.runCommand(Executer.java:104) >>>> at ij.Executer.run(Executer.java:58) >>>> at java.lang.Thread.run(Thread.java:613) >>>> >>>>Can someone interpert this for me? Thanks- Dave >>> >>>You can get this error when you attempt to export a QuickTime move >>>to a folder that has a name longer than 31 characters. >>> >>>-wayne |
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> Thanks Wayne-
> > What exactly is the support for hyperstacks here? Does it write out > separate movies for each channel or Z-stack? Or does it write a > single movie from all dimensions of the hyperstack in a canonical > order (eg CZT)? If T>1, it writes the current t-series (e.g., the "Mitosis" sample 5D stack, added in v1.42o), with the channels merged. if T=1 and Z>1, it writes the z-series (e.g., the "Confocal Series" and "Organ or Corti" sample 4D stacks), with the channels merged. If T=1 and Z=1, it writes the channels (e.g., the "Neuron" sample image). -wayne > > Bill > >> There is a new version of the QuickTime_Writer plugin at >> >> http://rsb.info.nih.gov/ij/plugins/movie-writer.html >> >> that suggests that the length of the directory name might be the >> problem when a "fBsyErr" exception occurs. This version also adds >> support for hyperstacks. >> >> -wayne >> >> On May 6, 2009, at 2:16 PM, Bill Mohler wrote: >> >>> Wayne- >>> >>> Is it possible for the QuickTime writer plugin to catch that >>> exception and throw up a message to the user suggesting that name >>> length of a directory might be a problem? Or are there just to many >>> ways for that exception to arise to focus the user on that likely >>> possibility. >>> >>> Thanks, >>> Bill >>> >>>> On May 6, 2009, at 12:34 PM, David Knecht wrote: >>>> >>>>> Several computers in my teaching lab have stopped exporting >>>>> quicktime movies from stacks. It worked all semester and also >>>>> worked today with some stacks but not others. The error message >>>>> is: >>>>> >>>>> quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers: >>>>> 7608000 >>>>> at quicktime.std.StdQTException.checkError(StdQTException.java:38) >>>>> at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) >>>>> at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) >>>>> at QuickTime_Writer.run(QuickTime_Writer.java:86) >>>>> at ij.IJ.runUserPlugIn(IJ.java:173) >>>>> at ij.IJ.runPlugIn(IJ.java:139) >>>>> at ij.Executer.runCommand(Executer.java:104) >>>>> at ij.Executer.run(Executer.java:58) >>>>> at java.lang.Thread.run(Thread.java:613) >>>>> >>>>> Can someone interpert this for me? Thanks- Dave >>>> >>>> You can get this error when you attempt to export a QuickTime move >>>> to a folder that has a name longer than 31 characters. >>>> >>>> -wayne > |
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This is a great addition to our set of tools. It would be nice to
have a choices dialog before writing so you can choose what channels, colors, merge method etc.. Does it use the color coding of the hyperstack to know how to merge? What if you want to do a subtract before merge for gray/color merges? Dave On May 7, 2009, at 3:46 PM, Wayne Rasband wrote: >> Thanks Wayne- >> >> What exactly is the support for hyperstacks here? Does it write out >> separate movies for each channel or Z-stack? Or does it write a >> single movie from all dimensions of the hyperstack in a canonical >> order (eg CZT)? > > If T>1, it writes the current t-series (e.g., the "Mitosis" sample 5D > stack, added in v1.42o), with the channels merged. if T=1 and Z>1, it > writes the z-series (e.g., the "Confocal Series" and "Organ or Corti" > sample 4D stacks), with the channels merged. If T=1 and Z=1, it writes > the channels (e.g., the "Neuron" sample image). > > -wayne > >> >> Bill >> >>> There is a new version of the QuickTime_Writer plugin at >>> >>> http://rsb.info.nih.gov/ij/plugins/movie-writer.html >>> >>> that suggests that the length of the directory name might be the >>> problem when a "fBsyErr" exception occurs. This version also adds >>> support for hyperstacks. >>> >>> -wayne >>> >>> On May 6, 2009, at 2:16 PM, Bill Mohler wrote: >>> >>>> Wayne- >>>> >>>> Is it possible for the QuickTime writer plugin to catch that >>>> exception and throw up a message to the user suggesting that name >>>> length of a directory might be a problem? Or are there just to >>>> many >>>> ways for that exception to arise to focus the user on that likely >>>> possibility. >>>> >>>> Thanks, >>>> Bill >>>> >>>>> On May 6, 2009, at 12:34 PM, David Knecht wrote: >>>>> >>>>>> Several computers in my teaching lab have stopped exporting >>>>>> quicktime movies from stacks. It worked all semester and also >>>>>> worked today with some stacks but not others. The error message >>>>>> is: >>>>>> >>>>>> quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers: >>>>>> 7608000 >>>>>> at quicktime.std.StdQTException.checkError(StdQTException.java: >>>>>> 38) >>>>>> at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) >>>>>> at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) >>>>>> at QuickTime_Writer.run(QuickTime_Writer.java:86) >>>>>> at ij.IJ.runUserPlugIn(IJ.java:173) >>>>>> at ij.IJ.runPlugIn(IJ.java:139) >>>>>> at ij.Executer.runCommand(Executer.java:104) >>>>>> at ij.Executer.run(Executer.java:58) >>>>>> at java.lang.Thread.run(Thread.java:613) >>>>>> >>>>>> Can someone interpert this for me? Thanks- Dave >>>>> >>>>> You can get this error when you attempt to export a QuickTime move >>>>> to a folder that has a name longer than 31 characters. >>>>> >>>>> -wayne >> Dr. David Knecht Department of Molecular and Cell Biology Co-head Flow Cytometry and Confocal Microscopy Facility U-3125 91 N. Eagleville Rd. University of Connecticut Storrs, CT 06269 860-486-2200 860-486-4331 (fax) |
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In reply to this post by Wayne Rasband
Sounds very useful!
>>Thanks Wayne- >> >>What exactly is the support for hyperstacks here? Does it write >>out separate movies for each channel or Z-stack? Or does it write >>a single movie from all dimensions of the hyperstack in a canonical >>order (eg CZT)? > >If T>1, it writes the current t-series (e.g., the "Mitosis" sample >5D stack, added in v1.42o), with the channels merged. if T=1 and >Z>1, it writes the z-series (e.g., the "Confocal Series" and "Organ >or Corti" sample 4D stacks), with the channels merged. If T=1 and >Z=1, it writes the channels (e.g., the "Neuron" sample image). > >-wayne > >> >>Bill >> >>>There is a new version of the QuickTime_Writer plugin at >>> >>> http://rsb.info.nih.gov/ij/plugins/movie-writer.html >>> >>>that suggests that the length of the directory name might be the >>>problem when a "fBsyErr" exception occurs. This version also adds >>>support for hyperstacks. >>> >>>-wayne >>> >>>On May 6, 2009, at 2:16 PM, Bill Mohler wrote: >>> >>>>Wayne- >>>> >>>>Is it possible for the QuickTime writer plugin to catch that >>>>exception and throw up a message to the user suggesting that name >>>>length of a directory might be a problem? Or are there just to >>>>many ways for that exception to arise to focus the user on that >>>>likely possibility. >>>> >>>>Thanks, >>>>Bill >>>> >>>>>On May 6, 2009, at 12:34 PM, David Knecht wrote: >>>>> >>>>>>Several computers in my teaching lab have stopped exporting >>>>>>quicktime movies from stacks. It worked all semester and also >>>>>>worked today with some stacks but not others. The error >>>>>>message is: >>>>>> >>>>>>quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers:7608000 >>>>>> at quicktime.std.StdQTException.checkError(StdQTException.java:38) >>>>>> at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) >>>>>> at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) >>>>>> at QuickTime_Writer.run(QuickTime_Writer.java:86) >>>>>> at ij.IJ.runUserPlugIn(IJ.java:173) >>>>>> at ij.IJ.runPlugIn(IJ.java:139) >>>>>> at ij.Executer.runCommand(Executer.java:104) >>>>>> at ij.Executer.run(Executer.java:58) >>>>>> at java.lang.Thread.run(Thread.java:613) >>>>>> >>>>>>Can someone interpert this for me? Thanks- Dave >>>>> >>>>>You can get this error when you attempt to export a QuickTime >>>>>move to a folder that has a name longer than 31 characters. >>>>> >>>>>-wayne |
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In reply to this post by Knecht, David
On May 7, 2009, at 4:50 PM, David Knecht wrote:
> This is a great addition to our set of tools. It would be nice to > have a choices dialog before writing so you can choose what channels, > colors, merge method etc.. Does it use the color coding of the > hyperstack to know how to merge? What if you want to do a subtract > before merge for gray/color merges? Dave The QuickTime_Writer plugin merges channels the same way ImageJ does when it displays the hyperstack so what you see on the screen is what you get in the QuickTime movie. Before saving, you can enable/disable channels using the "Channels" tool (press shift+z to open). Adjust the contrast and brightness of the current channel using the B&C tool (press shift+c to open). Change the color of the current channel by selecting a different LUT from the Image>Lookup Tables menu. Merge channels using the Image>Colors>Merge Channels command. Starting with the 1.42o daily build, the File>Save As>AVI command saves hyperstacks the same way the QuickTime_Writer plugin does. -wayne > On May 7, 2009, at 3:46 PM, Wayne Rasband wrote: > >>> Thanks Wayne- >>> >>> What exactly is the support for hyperstacks here? Does it write out >>> separate movies for each channel or Z-stack? Or does it write a >>> single movie from all dimensions of the hyperstack in a canonical >>> order (eg CZT)? >> >> If T>1, it writes the current t-series (e.g., the "Mitosis" sample 5D >> stack, added in v1.42o), with the channels merged. if T=1 and Z>1, it >> writes the z-series (e.g., the "Confocal Series" and "Organ or Corti" >> sample 4D stacks), with the channels merged. If T=1 and Z=1, it writes >> the channels (e.g., the "Neuron" sample image). >> >> -wayne >> >>> >>> Bill >>> >>>> There is a new version of the QuickTime_Writer plugin at >>>> >>>> http://rsb.info.nih.gov/ij/plugins/movie-writer.html >>>> >>>> that suggests that the length of the directory name might be the >>>> problem when a "fBsyErr" exception occurs. This version also adds >>>> support for hyperstacks. >>>> >>>> -wayne >>>> >>>> On May 6, 2009, at 2:16 PM, Bill Mohler wrote: >>>> >>>>> Wayne- >>>>> >>>>> Is it possible for the QuickTime writer plugin to catch that >>>>> exception and throw up a message to the user suggesting that name >>>>> length of a directory might be a problem? Or are there just to >>>>> many >>>>> ways for that exception to arise to focus the user on that likely >>>>> possibility. >>>>> >>>>> Thanks, >>>>> Bill >>>>> >>>>>> On May 6, 2009, at 12:34 PM, David Knecht wrote: >>>>>> >>>>>>> Several computers in my teaching lab have stopped exporting >>>>>>> quicktime movies from stacks. It worked all semester and also >>>>>>> worked today with some stacks but not others. The error message >>>>>>> is: >>>>>>> >>>>>>> quicktime.std.StdQTException[QTJava:7.6.0g],-47=fBsyErr,QT.vers: >>>>>>> 7608000 >>>>>>> at >>>>>>> quicktime.std.StdQTException.checkError(StdQTException.java:38) >>>>>>> at quicktime.std.movies.Movie.createMovieFile(Movie.java:115) >>>>>>> at QuickTime_Writer.writeMovie(QuickTime_Writer.java:109) >>>>>>> at QuickTime_Writer.run(QuickTime_Writer.java:86) >>>>>>> at ij.IJ.runUserPlugIn(IJ.java:173) >>>>>>> at ij.IJ.runPlugIn(IJ.java:139) >>>>>>> at ij.Executer.runCommand(Executer.java:104) >>>>>>> at ij.Executer.run(Executer.java:58) >>>>>>> at java.lang.Thread.run(Thread.java:613) >>>>>>> >>>>>>> Can someone interpert this for me? Thanks- Dave >>>>>> >>>>>> You can get this error when you attempt to export a QuickTime move >>>>>> to a folder that has a name longer than 31 characters. >>>>>> >>>>>> -wayne >>> > > Dr. David Knecht > Department of Molecular and Cell Biology > Co-head Flow Cytometry and Confocal Microscopy Facility > U-3125 > 91 N. Eagleville Rd. > University of Connecticut > Storrs, CT 06269 > 860-486-2200 > 860-486-4331 (fax) > |
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