skip the pop up window when openning images

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skip the pop up window when openning images

melkor2.0
Hello, I'm trying to use imagej from the console, and I find a problem to
use scripts, I need to open a file using the plugin loci bioformat importer,
and when I try, a configuration of some stuff from the bioformat importer
pops up. Does anybody know how to skip that window from the console, in
order to do choose always the same options from that window?

thanks,

ramon
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Re: skip the pop up window when openning images

Melissa Linkert-2
Hi Ramon,

You could use the Bio-Formats Windowless Importer plugin (Plugins > LOCI >
Bio-Formats Windowless Importer).  To run this plugin from a macro:

  run("Bio-Formats Windowless Importer");

You will be prompted for a file, but all of the other options windows will be
skipped.  If you already know which file is to be opened, you can do
this instead:

  run("Bio-Formats Windowless Importer", "open=[/path/to/file]");


Regards,
-Melissa

On Wed, Jan 19, 2011 at 02:12:47AM +0100, Ramon wrote:
> Hello, I'm trying to use imagej from the console, and I find a problem to
> use scripts, I need to open a file using the plugin loci bioformat importer,
> and when I try, a configuration of some stuff from the bioformat importer
> pops up. Does anybody know how to skip that window from the console, in
> order to do choose always the same options from that window?
>
> thanks,
>
> ramon
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Re: skip the pop up window when openning images

melkor2.0
Thank you very much, I'll give a try!
ramon

On 19 January 2011 16:07, Melissa Linkert <[hidden email]>wrote:

> Hi Ramon,
>
> You could use the Bio-Formats Windowless Importer plugin (Plugins > LOCI >
> Bio-Formats Windowless Importer).  To run this plugin from a macro:
>
>  run("Bio-Formats Windowless Importer");
>
> You will be prompted for a file, but all of the other options windows will
> be
> skipped.  If you already know which file is to be opened, you can do
> this instead:
>
>  run("Bio-Formats Windowless Importer", "open=[/path/to/file]");
>
>
> Regards,
> -Melissa
>
> On Wed, Jan 19, 2011 at 02:12:47AM +0100, Ramon wrote:
> > Hello, I'm trying to use imagej from the console, and I find a problem to
> > use scripts, I need to open a file using the plugin loci bioformat
> importer,
> > and when I try, a configuration of some stuff from the bioformat importer
> > pops up. Does anybody know how to skip that window from the console, in
> > order to do choose always the same options from that window?
> >
> > thanks,
> >
> > ramon
>