Re: Basic question on make movie plug in

[Henson, John]

I'm new to the ImageJ Interest Group and have a very basic question. I’m running a Scion firewire camera on a Mac using their ImageJ make movie plug in and it only allows for the viewing of the movie frames and not a simultaneous live image.  This makes it difficult to allow for focusing of the specimen on the fly while the movie is being captured.  Does anyone have a plug in that allows for simultaneous movie capture and live imaging?

Thanks, John

•••••••••••••••••••••••••••••••••••••••••••••••••••••••••••
John H. Henson, Ph.D.
Charles A. Dana Professor of Biology
Department of Biology / Biochemistry & Molecular Biology Program
Dickinson College, Carlisle, PA 17013
Phone: [phone]
E-mail: [hidden email]
http://www.dickinson.edu/departments/biol/faculty/henson.html



________________________________________
From: ImageJ Interest Group [[hidden email]] On Behalf Of prashant [[hidden email]]
Sent: Friday, June 05, 2009 8:37 AM
To: [hidden email]
Subject: Re: Compressed DICOM

On imagej "plugIn" menu choose PlugIn--->LOCI--->Bio Format Importer--->
And give path of your compressed Dicom file.

It is a plugIn from loci which handle compressed Dicom file.

thanks


-----Original Message-----
From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of Tim
Crowe
Sent: Friday, June 05, 2009 5:27 PM
To: [hidden email]
Subject: Compressed DICOM

I there any way to import compressed DICOM images into ImageJ 1.42o-64-bit?

Thanks

Tim


===================================

P Please consider the environment before printing this e-mail

Cleveland Clinic is ranked one of the top hospitals
in America by U.S. News & World Report (2008).
Visit us online at http://www.clevelandclinic.org for
a complete listing of our services, staff and
locations.


Confidentiality Note:  This message is intended for use
only by the individual or entity to which it is addressed
and may contain information that is privileged,
confidential, and exempt from disclosure under applicable
law.  If the reader of this message is not the intended
recipient or the employee or agent responsible for
delivering the message to the intended recipient, you are
hereby notified that any dissemination, distribution or
copying of this communication is strictly prohibited.  If
you have received this communication in error,  please
contact the sender immediately and destroy the material in
its entirety, whether electronic or hard copy.  Thank you.

[Aryeh Weiss]

How is video input acquireed with ImageJ on a macbook? I found some
plugins for specific cameras, as well and a plugin that acquires
though quicktime. However, I did not understand how to get this to work
with the built in camara on the macbook. My search of the archive on
osx+video did not turn up anything.

Having just moved to a mac from windows/PC , there are elementary
fuctions with which I am not yet familar, so I am sorry if this is a
silly question.  If I missed it in the archive or on the wiki, please
send the appropriate link.

Thanks in advance for your assistance.
--aryeh
--

Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: [phone]

[Wayne Rasband]

On Jun 5, 2009, at 10:05 AM, Aryeh Weiss wrote:

> How is video input acquireed with ImageJ on a macbook? I found some
> plugins for specific cameras, as well and a plugin that acquires
> though quicktime. However, I did not understand how to get this to
> work with the built in camara on the macbook. My search of the archive
> on osx+video did not turn up anything.
>
> Having just moved to a mac from windows/PC , there are elementary
> fuctions with which I am not yet familar, so I am sorry if this is a
> silly question.  If I missed it in the archive or on the wiki, please
> send the appropriate link.

The File>Import>Video command (QuickTime Capture plugin) should work
with the built in MacBook camera as long as you run ImageJ in 32-bit
mode by launching the "ImageJ" application instead of "ImageJ64".
QuickTime for Java does not work in 64-bit mode and Java 1.6, which is
used by "ImageJ64", only runs in 64-bit mode. There is more information
about the QuickTime Capture plugin at

      http://rsbweb.nih.gov/ij/plugins/qt-capture.html

-wayne

[Aryeh Weiss]

Thank you for the quick reply. I noticed that when I tried to go that
way, I got a message abotu having to use 32 bit Java.
Is there any way of acquiring video in 64 bit mode?

--aryeh

Wayne Rasband wrote:

> On Jun 5, 2009, at 10:05 AM, Aryeh Weiss wrote:
>
>> How is video input acquireed with ImageJ on a macbook? I found some
>> plugins for specific cameras, as well and a plugin that acquires
>> though quicktime. However, I did not understand how to get this to
>> work with the built in camara on the macbook. My search of the
>> archive on osx+video did not turn up anything.
>>
>> Having just moved to a mac from windows/PC , there are elementary
>> fuctions with which I am not yet familar, so I am sorry if this is a
>> silly question.  If I missed it in the archive or on the wiki, please
>> send the appropriate link.
>
> The File>Import>Video command (QuickTime Capture plugin) should work
> with the built in MacBook camera as long as you run ImageJ in 32-bit
> mode by launching the "ImageJ" application instead of "ImageJ64".
> QuickTime for Java does not work in 64-bit mode and Java 1.6, which is
> used by "ImageJ64", only runs in 64-bit mode. There is more
> information about the QuickTime Capture plugin at
>
>      http://rsbweb.nih.gov/ij/plugins/qt-capture.html
>
> -wayne
>

--
Aryeh Weiss
School of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: [phone]