Removing Ranges of Slices in a Stack

[Jacob Keller]

Dear List,

is there a way to select and/or remove ranges of slices in a stack, without
saving all the constituent images and removing them manually from the
directory?

Jacob

--
*******************************************
Jacob Pearson Keller
Northwestern University
Medical Scientist Training Program
email: [hidden email]
*******************************************

_______________________________________________________

ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Jacob Keller]

...Or at least a keyboard shortcut for "delete slice?"

Jacob

On Tue, May 29, 2012 at 2:21 PM, Jacob Keller <
[hidden email]> wrote:

> Dear List,
>
> is there a way to select and/or remove ranges of slices in a stack,
> without saving all the constituent images and removing them manually from
> the directory?
>
> Jacob
>
> --
> *******************************************
> Jacob Pearson Keller
> Northwestern University
> Medical Scientist Training Program
> email: [hidden email]
> *******************************************
>

--
*******************************************
Jacob Pearson Keller
Northwestern University
Medical Scientist Training Program
email: [hidden email]
*******************************************

_______________________________________________________

ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Cammer, Michael]

Image > Stacks > Tools > Make Substack...



-----Original Message-----
From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of Jacob Keller
Sent: Tuesday, May 29, 2012 3:21 PM
To: [hidden email]
Subject: Removing Ranges of Slices in a Stack

Dear List,

is there a way to select and/or remove ranges of slices in a stack, without saving all the constituent images and removing them manually from the directory?

Jacob

--
*******************************************
Jacob Pearson Keller
Northwestern University
Medical Scientist Training Program
email: [hidden email]
*******************************************

_______________________________________________________

ImageJ mailing list: http://imagej.nih.gov/ij/list.html

_______________________________________________________

ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Jacob Keller]

Great--this seems to be just what I want!

Thanks very much Michael,

Jacob

On Tue, May 29, 2012 at 2:34 PM, Cammer, Michael <[hidden email]
> wrote:

> Image > Stacks > Tools > Make Substack...
>
>
>
> -----Original Message-----
> From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of
> Jacob Keller
> Sent: Tuesday, May 29, 2012 3:21 PM
> To: [hidden email]
> Subject: Removing Ranges of Slices in a Stack
>
> Dear List,
>
> is there a way to select and/or remove ranges of slices in a stack,
> without saving all the constituent images and removing them manually from
> the directory?
>
> Jacob
>
> --
> *******************************************
> Jacob Pearson Keller
> Northwestern University
> Medical Scientist Training Program
> email: [hidden email]
> *******************************************
>
> _______________________________________________________
>
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
> _______________________________________________________
>
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

--
*******************************************
Jacob Pearson Keller
Northwestern University
Medical Scientist Training Program
email: [hidden email]
*******************************************

_______________________________________________________

ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Rasband, Wayne (NIH/NIMH) [E]]

On May 29, 2012, at 3:22 PM, Jacob Keller wrote:

> ...Or at least a keyboard shortcut for "delete slice?"

Delete a slice using the Image>Stacks>Delete Slice command then press shift-r (Process>Repeat Command) to delete additional slices.

-wayne

>
> Jacob
>
> On Tue, May 29, 2012 at 2:21 PM, Jacob Keller <
> [hidden email]> wrote:
>
>> Dear List,
>>
>> is there a way to select and/or remove ranges of slices in a stack,
>> without saving all the constituent images and removing them manually from
>> the directory?
>>
>> Jacob
>>
>> --
>> *******************************************
>> Jacob Pearson Keller
>> Northwestern University
>> Medical Scientist Training Program
>> email: [hidden email]
>> *******************************************
>>
>
>
>
> --
> *******************************************
> Jacob Pearson Keller
> Northwestern University
> Medical Scientist Training Program
> email: [hidden email]
> *******************************************
>
> _______________________________________________________
>
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

_______________________________________________________

ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Robert Dougherty]

Jacob,

My Stack Sorter plugin can perform various operations with stacks, including inserting other stacks with mismatching dimensions.

Bob

>>
>> Jacob
>>
>> On Tue, May 29, 2012 at 2:21 PM, Jacob Keller <
>> [hidden email]> wrote:
>>
>>> Dear List,
>>>
>>> is there a way to select and/or remove ranges of slices in a stack,
>>> without saving all the constituent images and removing them manually from
>>> the directory?
>>>
>>> Jacob
>>>
>>> --
>>>

Robert Dougherty, Ph.D.
President, OptiNav, Inc.
1414 127th Place NE #106
Bellevue, WA 98005
Tel. [phone]
FAX [phone]
www.optinav.com
[hidden email]

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Michael Doube-3]

Hi Jacob,

> is there a way to select and/or remove ranges of slices in a stack, without
> saving all the constituent images and removing them manually from the
> directory?

BoneJ has a little utility that does this - "Delete Slice Range":
http://bonej.org/utilities

Michael

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