boneJ / local thickness

[Lonnie Ulrich Andersen]

Hi,

If I make a thickness analysis using the above on a stack of images. Can I then get some statistics on the thickness distribution? I need to find a way to compare several stacks to see the difference in thickness.

Best regards

Lonnie Andersen

Consultant,PhD
Metrology and Quality Assurance
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Danish Technological Institute
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[Michael Doube-4]

Dear Lonnie,

First, apologies for the slow reply. My mail server inexplicably marked your message as spam, and I just found it now.

> If I make a thickness analysis using the above on a stack of images. Can I then get some statistics on the thickness distribution? I need to find a way to compare several stacks to see the difference in thickness.

Yes, you can get statistics. Thickness calculates maximum, mean and standard deviation by default. If you have some other needs like making a histogram, then select the graphical output option to get a 3D map of the thickness values, which you can analyse as you wish.

You might be interested to read the docs and a couple of recent threads on the BoneJ user group:

http://bonej.org/thickness
https://groups.google.com/forum/?fromgroups#!topic/bonej-users-and-developers/3UptKOXzQRs
https://groups.google.com/forum/?fromgroups#!topic/bonej-users-and-developers/L5Bm3PaARYw

Michael

<http://www.rvc.ac.uk>

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